Pseudomonas bambusae: AAEO81_01670
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Entry
AAEO81_01670 CDS
T11347
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pbab Pseudomonas bambusae
Pathway
pbab02025
Biofilm formation - Pseudomonas aeruginosa
pbab03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbab00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AAEO81_01670 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AAEO81_01670 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbab02044
]
AAEO81_01670 (tssM)
Secretion system [BR:
pbab02044
]
Type VI secretion system
Imp/Vas secretion system core components
AAEO81_01670 (tssM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
WZO62000
LinkDB
All DBs
Position
369389..372892
Genome browser
AA seq
1167 aa
AA seq
DB search
MKAFFGFVIRWVVPVLGLIALSLIIWFVGPVLDMLVPEGRRWALIVLLFAIWIAWRVFRI
VQARRHAANVMASLAAETPPDPASVATAQELATLRQRMDEALTLLKKARLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQMGAGAIRGVGGTRNCDWWFTDEAVLLDTAG
RYTTQDSHAQVDKAAWLGFLDLLKNQRSRRPIDGAFIAISLSDLLLGSEAERAAHATAIR
ARIQELYSQLGVRFPIYVMLTKLDLVPGFMEFFDALSKEERAQVWGMTFALDDGKQADGP
LTNFLSEFALLEQRLNARLVERLQQERDPARRDLIYGFLQQFGALKETLQGFLEGVFKPN
AFEDRALLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQTGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWLTRGALAATVAVVLVVGTLWVISYRANQAYIAQVDQKVAP
LGQSVQSLSPAQRDVLAVLPLLNAVRHLAGDPPGMAQGLGLYQGDMLEAESGSVYRKLLI
AVFAPRLVTRVEEQLRSGGSSDFLYEGLKAYLMLADSEHYDPDFIKAWVALDWDQSLPRD
LPPDQRQALGEHLQALFERHPPNARLDQRLIDDLRRQLQQLPVAQRVYDRVKRQKLPDSV
PDFRLTDAAGRDAALVFARKSGKPLGEPLSGFFTAKGYREVFLATSLSQAGTLAEEQWVL
GLDRADQQNVVSLAGDVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQQEDKLLADQGKKVEGGVDQLKQRLGSILGQEQVSQTAAPAAVEDP
VSAHFAELNAFVTKGEGEPAAVDGLLADMNALYVQVSAMVGASGDALLGEAKNSASAAAT
RVNLNADREPPVVQSLVKSVVSSTTNTMMGGVRNQLNAAWVSDVVNVYRQSLSGRYPLAP
GSARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSASSWRWQPGAAQKLGINASVLQTF
QRAAAIRDAFFRSGGVQPTVRFELKPVAMDASVTQFLLDLDGQQISYDHGPSRPVAMQWP
NPGSIGVVRLSISPPAASGRSGITLEGPWAWFRLLDQSDLVAGGSPDRFNLRLRVDNASI
SYELRANSAFNPFKSRVLSGFSLPERL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcggttttgtgattcgctgggtcgtgccagtgctcgggctgatcgcg
ctgagcctgatcatctggttcgtcggcccggtgctggacatgctggtgcccgaaggtcgg
cgctgggcgttgatcgttctgctgttcgccatctggatcgcgtggcgggtctttcgtatc
gttcaggcccgtcgccacgcggcgaacgtcatggccagcctggccgcggaaaccccaccg
gaccctgccagcgtcgccactgcgcaagagttggccaccttgcgtcaacgcatggacgaa
gccctcacgctcctgaaaaaagcgcgcttgggcggggatgaacgtcgcaacctctacgag
ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccaccgcgctggtcaat
tccgggctgcattttccgctggccgcacagatgggcgcgggcgcgattcgaggcgtgggc
ggcacgcgcaattgcgactggtggttcaccgacgaggccgttctgctcgacaccgcaggc
cgctacaccacgcaagacagccacgctcaagtcgacaaagcagcctggctgggctttctc
gacctgctgaaaaaccagcgctcccgtcgccccatcgacggcgcgttcatcgccatcagc
ttgtccgatctgctgctgggcagcgaggccgagcgcgctgctcatgcgacggcaattcgt
gcgcggattcaggagctttatagtcaactgggcgtgcgcttcccgatttacgtgatgctg
accaagctcgatttggtgcccggcttcatggagttcttcgatgcgttgagcaaggaagag
cgcgcgcaggtctggggcatgaccttcgccctcgacgatggcaagcaggctgacggcccg
ctgacgaacttcctcagcgaatttgccctgctggaacagcgcctgaatgcacggctggtc
gagcgcttgcagcaggagcgcgacccggcaagacgggatctgatttacggttttcttcag
caattcggcgcgctgaaagaaaccctgcaaggctttctcgaaggcgttttcaagcctaat
gcgttcgaagaccgggcgttgctgcgcggggtgtatttcaccagtggcacgcaggaaggc
agcccgatcgatcggctgatcggcgccatggcccagagcatgaatctggaccgccagcac
ttggcacgccagaccggcacgggtcgcagttacttcatcgaaaaactgttcaccgccgtc
gccttcgccgagcgcgggttggtgggtgtgaacccgaaagtcgaacgtcgtcgcaaatgg
ctgacccgtggcgcgctggcggcgaccgttgcggtggtgttggtggtcggcaccttgtgg
gtgatcagctaccgcgccaatcaggcgtacatcgcgcaggtcgatcagaaagtcgcaccc
cttggccaaagcgtgcagagcctgagccctgcgcagcgcgacgtattggccgtgctgccg
ctgctcaacgccgtgcgtcatttggcgggcgatcctccgggcatggcgcaaggtttgggg
ctgtatcagggcgacatgctggaagccgaatccggcagcgtgtaccgcaaactgctgatc
gcggtgttcgcgccgcgcctggtcacccgagtggaagagcaattgcgcagcggtggcagt
tcggattttctctatgaaggtttgaaggcttatctgatgctggctgacagcgagcattac
gacccggatttcatcaaggcatgggtcgcgctggattgggatcaaagcctgcctcgcgat
ctgccgcctgatcagcgtcaggcactgggcgagcacttgcaggcgttgttcgaacgtcat
ccgcctaatgcccgtctggatcaacggctgatcgatgatttacgtcggcaattgcagcaa
ctgccggtagctcagcgtgtctacgaccgggtcaaacgccagaagctgcccgacagcgtc
ccggattttcgcctgaccgacgctgcggggcgtgatgctgcactggtgttcgcgcgcaag
agcggcaagccattgggcgaaccgctgagcggcttcttcacggccaagggctatcgcgag
gtgtttctggccaccagcctgagtcaggccggaaccctggcggaagaacagtgggtgttg
gggctggatcgtgccgatcaacagaacgtcgtcagcctcgccggggatgtgcggcgcctg
tactttcaggattaccagcgtcagtgggatgcattgctggcggacatcgatttcgtgccg
atcaccagcgtggcgcaggcggctgacgtgttacgggtgatttcggggccgacctcgccg
ctgaaaaagctgctggtggcggtagcgaaggagactgatctgcaacaggaagacaagctg
ctcgccgatcagggcaagaaagttgagggcggtgtcgatcagctcaagcaacgcctgggc
tcgatcctgggtcaggaacaggtcagtcagacagccgcgcctgccgctgttgaagatccg
gtgagcgcgcacttcgctgaactcaacgcgtttgtcacgaagggagagggtgaaccggca
gctgtcgatggcctgctcgcggacatgaacgcgctgtacgttcaggtcagcgcgatggtc
ggtgccagtggcgatgcgttgctgggcgaagcgaaaaactccgccagcgctgcggcgacg
cgagtgaatctgaacgccgaccgggaaccaccggtggtgcagagtctggtgaagtcagtc
gtcagttcgaccaccaacacgatgatgggcggcgtgcgcaatcagctgaatgcggcgtgg
gtcagcgatgtagtgaacgtttatcgccagtcccttagtggtcgttacccgctggcaccg
ggcagcgcacgtgacgccacgctggacgacttcggtcagttcttcggcgtgggcggagtg
atggacaattacttccgcaaatacctgcaaccctatgtcgatacctcagcttccagctgg
cgctggcaaccgggcgccgcgcagaagctgggcatcaacgcctcggtcttgcagaccttc
cagcgcgcagcggcgattcgcgatgccttcttccgttccggtggcgtgcagccgaccgtg
cgtttcgaactgaagcccgtcgcgatggacgcttcagtcacccaattcctgctggacctc
gacgggcagcagatcagctacgaccacggccccagccgccccgtcgccatgcaatggccg
aaccccggcagcatcggcgtagtgcgcctgtcgatctcgccgcctgcggccagtggtcgt
tccggcatcacactcgagggtccttgggcgtggttccgtttgctggaccaatcggacctc
gtcgccggtggatcgcccgaccgcttcaacctgcgattgcgggtcgacaacgccagcatt
tcctacgagttgcgcgccaacagcgcgttcaaccctttcaaaagccgtgtgttgagcggt
ttcagcctgccggagcggttatga
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integrated database retrieval system
