Pseudomonas bambusae: AAEO81_03515
Help
Entry
AAEO81_03515 CDS
T11347
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbab Pseudomonas bambusae
Pathway
pbab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAEO81_03515 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbab03021
]
AAEO81_03515 (rpoA)
03400 DNA repair and recombination proteins [BR:
pbab03400
]
AAEO81_03515 (rpoA)
Enzymes [BR:
pbab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAEO81_03515 (rpoA)
Transcription machinery [BR:
pbab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAEO81_03515 (rpoA)
DNA repair and recombination proteins [BR:
pbab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAEO81_03515 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
WZO62339
LinkDB
All DBs
Position
770068..771069
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLVVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacaccccgtcacattgatgtacaggttgtcagt
ccaacccgcgccaaaatcactctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgctgcgccgcatcctgttgtcctccatgcccggctgtgcagtagtcgaggccgag
attgacggtgtacttcatgagtacagcgccattgaaggtgtacaggaagatgtcattgaa
atcctgttgaaccttaaaggtctggctatcaagctgcacggtcgagacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaaccccgatcacgtaatcgctaacctggcgtctaacggcgccctgaac
atgaagctcgttgtagctcgtggtcgcggttatgaaccagcagactcgcgtcagagcgac
gaagacgaaagccgcagcattggtcgcttgcagctcgactcttcgttcagcccggtacgt
cgtatcgcatacgtggtggaaaacgcccgtgtcgaacagcgtaccaacctggacaaactg
gttatcgatctggaaaccaacggtactctggaccctgaagaggcaatccgtcgcgctgca
accattctgcaacagcagttggctgcgttcgtcgacctcaaaggtgacagcgaacctgtt
gtagtcgaacaggaagacgagatcgatccgatcctgcttcgtccggttgacgatttggaa
ctgaccgtacgttcggccaactgccttaaggcggagaacatttactacatcggtgatctg
atccagcgcactgaagtggaactgttgaagactccgaacctgggcaagaaatccttgacc
gaaatcaaggacgttctggcttctcgtggtctctccctcggcatgcgcctcgacaactgg
ccgcctgcaagtcttaagaaggacgacaaggcgactgcctga
DBGET
integrated database retrieval system
