KEGG   Pseudomonas bambusae: AAEO81_04370
Entry
AAEO81_04370      CDS       T11347                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pbab  Pseudomonas bambusae
Pathway
pbab03030  DNA replication
pbab03430  Mismatch repair
pbab03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AAEO81_04370
   03430 Mismatch repair
    AAEO81_04370
   03440 Homologous recombination
    AAEO81_04370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbab03032]
    AAEO81_04370
   03400 DNA repair and recombination proteins [BR:pbab03400]
    AAEO81_04370
Enzymes [BR:pbab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AAEO81_04370
DNA replication proteins [BR:pbab03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AAEO81_04370
DNA repair and recombination proteins [BR:pbab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AAEO81_04370
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 Amino_oxidase Ribosomal_L26
Other DBs
NCBI-ProteinID: WZO62499
LinkDB
Position
940631..941245
AA seq 204 aa
MQERIAVIDFETTGISPNSNCRATEIAVVIMEEGVIVERYQSLMNAGVRIPSFIESLTGI
SNSMLRTAPPAERVMNEVAEFVGLTPLVAHNAAFDQKFWDYELSRIKRNREQSFACSMLL
ARRLLPAAPNHKLGTLTSWAGLPDTGKAHRAMADAEMAANLTAHLSQELRTTHGLAGVSH
KLMCTLQKVPAKKIAEAISKHRGF
NT seq 615 nt   +upstreamnt  +downstreamnt
atgcaagaacgcatcgccgtcatcgacttcgaaactaccggcatttctcccaacagcaat
tgtcgggcgaccgagattgccgtggtcatcatggaagagggcgtcatcgtcgagcgttat
cagagcctgatgaacgctggcgtgcgtataccgtcgttcatcgaatcgctcaccggcatc
agcaacagcatgcttcgtaccgcgcccccggccgagcgagtcatgaacgaagtggcggag
ttcgtcgggttgacgccactggtcgcgcacaacgccgcgttcgaccagaaattctgggac
tacgaactgtcccgtatcaaacgtaaccgcgagcaaagctttgcttgctcgatgctgttg
gcgcgacgtctactgcctgccgcgccgaatcacaaactcggcacgttgacgtcctgggcg
gggctgccagataccggcaaggctcaccgggccatggccgatgccgagatggcggccaac
ctcacggcgcacctgagtcaggaactgcgcaccactcacggtctggccggggtttcccac
aagttaatgtgcacgttgcagaaggtccccgcgaaaaaaatcgctgaggcaatcagcaag
catcgtgggttctga

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