KEGG   Pseudomonas bambusae: AAEO81_04625
Entry
AAEO81_04625      CDS       T11347                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
pbab  Pseudomonas bambusae
Pathway
pbab02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pbab00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AAEO81_04625
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pbab02022]
    AAEO81_04625
Two-component system [BR:pbab02022]
 NtrC family
  HydH-HydG (metal tolerance)
   AAEO81_04625
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 AAA_2 AAA_16 Mg_chelatase AAA HTH_11 HTH_23 HTH_AsnC-type AAA_22 AAA_7 HTH_8
Other DBs
NCBI-ProteinID: WZO62547
LinkDB
Position
complement(1028457..1029896)
AA seq 479 aa
MPHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPSFDLIVSDLRLPGAPG
TELIRLGQGKPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVSRILRDRQTVQ
SIQAERVASAGKASGSDKSAPDNSNGEIGIIGSCPPMQDLYNKIRKVAPTDSNVLVQGES
GTGKELVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAGLVEA
ADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKV
GQFREDLYYRLHVIALKLPALRERGSDVNEIANAFLARQSAKAGRTDLRFGPDAEQAIRH
YSWPGNVRELENAVERAVILCESPEISADLLGIDIELSDLDVEEFIGLAPQQPSSSSTAH
EPTEDLSLEDYFQHFVLEHQDHMTETELARKLGVSRKCLWERRQRLGIPRRKTGVASET
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgccgcacattctgatcgtcgaagacgaaactattatccgctctgccttgcgtcgcctg
ctggaacgtaatcagtaccaggtcagtgaagccggctccgtgcaggaagctcaggaacgt
ttcagcatcccctcgttcgacctgatcgtcagcgatttgcgcctgcccggtgcccccggt
accgagctgatccggctcggccagggcaaaccggtgctgatcatgaccagctacgccagc
ctccgctcggccgtggactcgatgaaaatgggcgctgtggattacatcgccaagcccttc
gaccacgacgaaatgctgcaagccgtgtctcgcattctgcgagaccgacagaccgtgcaa
agcatccaggctgaacgcgtggcctcggctggcaaggcgtcggggtccgacaaatcagcc
cctgacaacagcaatggcgagatcgggatcatcggctcttgcccgccgatgcaagacctt
tacaacaagatccgtaaggtcgccccgactgactccaacgtgctggtgcaaggtgaatca
ggtacgggtaaagagttggtcgcccgagcgctgcacaacctgtcccgccgcgccaaggca
ccgatgatttcggtgaactgtgccgcgatccctgaaacgctgatcgagtccgagctgttc
ggccacgaaaaaggcgcgttcaccggcgccagcgccgggcgtgcaggcctggttgaagcc
gccgacggcggaaccctgtttctcgatgaaattggcgaattgcctctcgaagctcaagcc
cgtctgctgcgtgtgcttcaggaaggcgagattcgtcgggttggctcagtacagtcgcag
aaggttgatgtgcgcctgattgccgcgacccaccgagacctgaaaagcctggccaaagtc
gggcagttccgtgaagacctttactaccgtctgcacgtcattgccttgaagctgccggcc
ctgcgcgagcgtggctcggacgtgaacgaaatcgccaatgcgttcctggctcgccaaagc
gccaaagctggccgtaccgacttgcgctttggaccggacgccgaacaggcgatccgccat
tactcgtggccgggtaatgtccgcgaactggaaaacgctgttgagcgcgccgtcatcctc
tgcgagagcccggaaatttccgccgaccttttgggcatcgacatcgagctgagcgatctg
gacgtcgaggagttcatcggcctggcgccgcagcagccttcatccagctcaacggctcat
gaacctacggaagacttgtccctggaggactacttccagcacttcgtgcttgagcatcag
gaccacatgaccgagaccgaactggcgcgtaagcttggcgtcagccgtaaatgcctgtgg
gagcgtcgtcaacggctgggcatcccgcgtcgcaaaaccggtgtagccagcgaaacctga

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