KEGG   Pseudomonas bambusae: AAEO81_07000
Entry
AAEO81_07000      CDS       T11347                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pbab  Pseudomonas bambusae
Pathway
pbab03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pbab00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AAEO81_07000 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbab03019]
    AAEO81_07000 (rnc)
   03009 Ribosome biogenesis [BR:pbab03009]
    AAEO81_07000 (rnc)
   03036 Chromosome and associated proteins [BR:pbab03036]
    AAEO81_07000 (rnc)
Enzymes [BR:pbab01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     AAEO81_07000 (rnc)
Messenger RNA biogenesis [BR:pbab03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AAEO81_07000 (rnc)
Ribosome biogenesis [BR:pbab03009]
 Eukaryotic type
  90S particles
   RNase
    AAEO81_07000 (rnc)
 Prokaryotic type
  rRNA processing factors
   AAEO81_07000 (rnc)
Chromosome and associated proteins [BR:pbab03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     AAEO81_07000 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: WZO62980
LinkDB
Position
1551707..1552396
AA seq 229 aa
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDSGMDMARERVLSWLASEFDSLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgtgtcattgagtcgcctggagcgtcagctcggctataccttcaaggaccaggaa
ttgatggtcctggcattgacccaccgcagttttgccgggcgcaacaacgagcgtctggaa
ttcctcggtgatgccatcctcaacttcgtggcaggcgaggcgctgttcgagcgttttccg
caggcccgcgaaggtcagttgtcccgtttgcgcgcacgtctggtgaagggcgagaccctc
gccttgctggcccgcggtttcgatctgggtgaatacctgcgactgggctccggggagttg
aaaagtggcggttttcgtcgcgaatcgattctggccgacgccctcgaagcgttgatcggc
gcgatctatctggattccggcatggacatggcgcgcgaacgcgtgctgtcctggctggcc
agcgagttcgacagcctgacgctggtggacaccaacaaagacccgaaaacccgactgcag
gaattcctccagtcccgcgcctgtgaattgccgcgctacgaagtggtggatattcagggc
gagccgcattgccggacgtttttcgtcgaatgcgagatcaccttactgaacgaaaaaagc
cggggacaaggtgtcagccgtcgcattgccgaacaggtagcggcagccgcagcccttatt
gccctgggtgtggagaatggcaatgactga

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