Pseudomonas bambusae: AAEO81_09670
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Entry
AAEO81_09670 CDS
T11347
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pbab Pseudomonas bambusae
Pathway
pbab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAEO81_09670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbab03019
]
AAEO81_09670
03009 Ribosome biogenesis [BR:
pbab03009
]
AAEO81_09670
Enzymes [BR:
pbab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAEO81_09670
Messenger RNA biogenesis [BR:
pbab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAEO81_09670
Ribosome biogenesis [BR:
pbab03009
]
Prokaryotic type
rRNA helicases
AAEO81_09670
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WZO63465
LinkDB
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Position
2075018..2076694
Genome browser
AA seq
558 aa
AA seq
DB search
MTQETGGFAALDLHPNIVAAVIATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAF
ALPILNRIDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK
AIRNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPET
RQTVLFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHADQKTSAVLSLL
EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTGQKVAEVRLPDSQAVLDARIKKLTNSLAPLVADAEASHGELLDRLTADIGCTPRAL
AAALLRKATNGQALTLAAIEKERPLVPNNAPRGDRADRPSGDRPDRGDRERRAPMPLAEG
RARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLERLLAKL
KDTRVAGKQLKLRRYRED
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaaccggcggcttcgccgctctcgaccttcatccgaatattgttgcagcc
gttatcgctaccggctacgaagagccttcggccattcagcagcaatcgatcccgattatt
cttgccggtcacgacatgatcggtcaggcgcagacaggtaccggtaaaaccgcggccttc
gcactgcctatcctgaaccgcatcgacccggcaaaacgcgagccgcaagcgctgatcctc
gcgccgacccgcgaactggccctgcaagtcgccaccgcgttcgaaacctacgccaagcaa
atgccgggcgtgaccgtcgtggccgtctacggcggtgcgccgatgggcccacagctgaaa
gccatccgtaacggcgcgcaaatcgtcgtcgctaccccgggccgcctgtgcgatcacctg
cgtcgtgacgaaaaagtcctggcgaccgtgaaccacctggtgctcgacgaagctgacgaa
atgctgaagctgggcttcatggacgacctcgaagtcatcttcaaggccatgcctgaaact
cgccagaccgtgctgttctcggcgaccctgccgcagtcgatccgtgcgatcgccgagcgt
cacctgaaagacccgaaacacgtcaagatccagagcaagacccagaccgtcaccgcgatc
gagcaggctcacctgctggttcacgctgaccagaagacctctgccgtgctgagcctgctg
gaagtcgaagatttcgacgccctgatcatgttcgtccgcaccaagcaggccactctggac
ctggcgagcgctctggaagccaaaggctacaaggctgccgcgctgaacggtgatatcgcc
cagaaccagcgtgagcgcgtcatcgactcgctgaaagatggtcgcctggacatcgttgtc
gcgaccgacgttgctgcccgtggtctggacgttccgcgcatcactcacgtattcaacgtc
gacatgccgtacgatccggaatcctacgttcaccgtatcggccgtaccggtcgtgccggt
cgcgaaggccgtgcgctgctgctggtgaccccgcgtgagcgccgcatgctgcaagtgatc
gagcgtgtgaccggtcagaaggttgccgaagttcgcctgccagactcgcaagccgttctc
gatgcccgcatcaagaaactgaccaacagcctcgcgccactggtggccgatgccgaagcc
agccatggcgagctgctggaccgtctgactgccgacatcggttgcactccgcgtgccctg
gctgccgcactgctgcgcaaggccaccaacggccaggcgctgaccctcgctgccatcgag
aaagagcgtccattggtgccgaacaatgcaccgcgtggcgaccgtgccgatcgtccgtcg
ggcgaccgtcccgatcgtggcgaccgcgagcgtcgtgcgccgatgccactggctgaaggc
cgtgcacgttgccgtaccgcgctgggtgcgcgtgacggtatcgctgccaaaaacctgctg
ggcgccatcctcaacgaaggcggtctggcccgcgaagccatcggccgcatccaggtgcgt
gacagcttcagcctcgtcgagctgccggaagacggccttgagcgtctgctggccaagctg
aaagacacccgcgttgcgggcaagcagctgaaactccgtcgctatcgcgaagactga
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