KEGG   Pseudomonas bambusae: AAEO81_15830
Entry
AAEO81_15830      CDS       T11347                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
pbab  Pseudomonas bambusae
Brite
KEGG Orthology (KO) [BR:pbab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbab02044]
    AAEO81_15830 (sctD)
Secretion system [BR:pbab02044]
 Type III secretion system
  Type III secretion core apparatus
   AAEO81_15830 (sctD)
SSDB
Motif
Pfam: Yop-YscD_cpl Yop-YscD_ppl_3rd FHA Y4YQ_C
Other DBs
NCBI-ProteinID: WZO59032
LinkDB
Position
complement(3428786..3429796)
AA seq 336 aa
MFELRVLTGLHQGAALPLVGEQWVIGSDEEQDLALHDPGVEQVHCRLQRQGEGFVLNAAE
GQIGDQEGHRHATAELIPNTAFVLGSVWLCVSAAEDAWPSVPVVIPQPRVEAAQETPVTE
PPDPAPDARSSAPPLEKVESRSRLLNRTTGVIVGVLLGVAGSAWSLTRSSGSPDTVAAVA
MVQPSKPSAATTKPALKPVAEPASKRIHLANVDDTRRQLTTMLSDRLLSGVDVQQTPEGL
VLSGNLKAESQVVYQRMLQRFKDRYDTPVGVIDNVTTSSNGLPFTIVQIMSGPHAHLVTA
DGHRLYVGDELAGLRLTRIDDNRIQFDGERHYEVNW
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgtttgaattacgggtgttgaccggcctgcatcaaggcgctgccctgcccctggtgggt
gaacaatgggtgatcggctcggacgaggagcaggacctggcgctgcacgacccgggtgtc
gaacaggtgcattgccgcttgcagcgccaaggcgaagggttcgtgctgaacgcggccgag
ggtcagatcggcgatcaggaaggccatcgtcacgcgaccgccgaactgatccccaacacc
gcgttcgtgctgggttcggtgtggctgtgcgtgtcggcggccgaagatgcgtggccatcg
gtgccggttgtcatcccgcaacctcgggtcgaagccgcgcaggaaacgcctgtgaccgag
ccgcccgaccctgcaccagacgcccgcagcagcgcacccccgctggaaaaagtcgagtcg
cgctcaaggctgttgaaccgcaccaccggggtcatcgtcggcgtgttgttgggcgttgct
ggcagcgcctggagcctgacccgtagcagcggcagtccggacacggtggccgccgtcgcc
atggtccaaccgtcgaagccttccgcagcaaccacaaaacccgccttgaaacccgtcgcg
gaacctgcttcaaaacgtattcacctggccaatgtcgacgacacccggcgccagctcacc
accatgctcagcgaccgcctgctcagtggcgtcgatgtgcagcagacgcccgaaggtctg
gtgttgagcggcaacctgaaagccgagtcgcaggtggtgtatcagcgcatgctgcaacgc
ttcaaagaccgttatgacacgcccgtcggcgtgatcgacaacgtcaccacgtccagcaac
ggcctgccgttcaccatcgtgcagatcatgtccgggccgcacgcgcatctggtcacggcg
gacgggcatcggctgtacgtcggcgatgaactggccgggttgcgcctgacccgcatcgac
gacaatcgcattcagttcgacggcgaacggcattacgaggtgaactggtga

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