Pseudomonas bambusae: AAEO81_22940
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Entry
AAEO81_22940 CDS
T11347
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pbab Pseudomonas bambusae
Brite
KEGG Orthology (KO) [BR:
pbab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbab03000
]
AAEO81_22940
Transcription factors [BR:
pbab03000
]
Prokaryotic type
Helix-turn-helix
Other families
AAEO81_22940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
HTH_7
AAA_5
HTH_23
PAS_7
AAA_2
nSTAND3
HTH_11
HTH_17
HTH_20
HTH_3
HTH_22
HTH_24
nSTAND6
HTH_10
Mg_chelatase
HTH_29
AAA_7
HTH_28
HTH_26
HTH_38
HTH_36
HTH_psq
Phage_CP76
HTH_AsnC-type
Xre-like-HTH
DUF2089
HTH_Tnp_1
TetR_N
MerR
Sec8_N
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
WZO60354
LinkDB
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Position
5023581..5025428
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AA seq
615 aa
AA seq
DB search
MAATGASTAHDTIIRDSWARCREFGLDHQSRPAFNRLPEQQVSQLLERHQSLVQTTHQQV
LPFYENILSNSNCLILLADQQGQVLNSWGTKRFVEPDQQRGFIAGASWLERGVGTNAIGT
ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDASRRMVAVLDVSSDSFLPPSHTLGMVKM
MSQTIENRLILDQFQHGYFQMTFNTGLNNLDSQWAGLLVFDESGRIVCANRRADNLLGVR
LVQANIEQLFKAPIAHLLDQQEGQPFALQASGHNRFHGVIKRPKAPVLKFRAATELKKPD
TAPPGFGDEKVAKATRQAQRLLEKNVPLLILGETGAGKEVFVKHLHQRSSRADQPFIAVN
CAAIPSELVEAELFGYEKGAFTGAHQKGSVGLIRKADKGTLFLDEIGDMPLPVQARLLRV
LQERCVQPLGSSELFPVDIRVISATHCSLREQVQSGRFRQDLYYRISGLNLELPPLRDRT
DKAELVQMIWQQHREPQQTAGFESSVLALFERHPWPGNLRQLSNVIQVALALADDEPIST
EHLPEDFFADLELADLEMQSENSERVTAFNRKAALDTPEELNELLQAAGGNISQLAKRLG
VSRNTLYKRLREQGF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccgctacaggcgcatccactgctcacgacaccatcattcgggactcatgggcccgc
tgccgagagttcggcctggaccatcagtcacgccccgccttcaatcggctgcctgaacag
caggtttctcagctgctggaacgccatcagtcgctggtgcagaccacccatcaacaggtg
ctgcccttctacgagaacattctcagcaactccaactgcctgattctgctggctgaccaa
caaggccaggtgctcaattcgtggggcaccaagcgcttcgtcgaaccggatcagcagcgg
gggttcatcgccggggccagttggctcgaacgcggggtcggcaccaacgccatcggcacg
gcgctggcctgtgaacaggctgttcacattgaacacgatgaacactttttgaaggccaac
cgtttcatgacgggctctgcggcgccgattttcgatgcctcgcgccgtatggtcgcggtg
ctcgatgtgtccagcgacagcttcctgccaccctcccacacgctggggatggtgaagatg
atgagccagaccattgagaaccggctgatcctggaccagttccagcacggctattttcag
atgacgttcaacaccgggctgaacaacctcgacagccaatgggctggtttgctggtattc
gatgaaagcggccgtatcgtttgcgccaatcgccgggccgacaacctcttgggcgtacgt
ctggtgcaggccaacatcgagcaactgttcaaggcgcccattgcgcatttgctcgatcag
caggaaggtcagcctttcgcgctgcaagcctcggggcataaccggtttcacggggtgatc
aaacggcccaaggccccagtgctgaaattcagggctgcgactgagctgaagaaacccgac
accgccccgcccggttttggcgatgaaaaggttgcgaaagccacgcggcaagcgcagcgt
ttgttagagaaaaacgtgccgctgttgattctcggcgagactggcgcgggcaaagaagtg
ttcgtcaaacacctgcatcaacgcagctcccgggctgatcagccgttcattgcggtgaac
tgcgccgccattccctcggagttggtggaggccgagctgttcggttacgaaaaaggcgcg
ttcacgggcgctcaccagaaagggagcgtcggcctgattcgcaaggcggacaagggcacg
ctgtttctcgatgaaatcggcgacatgcccctgcccgtccaggcccgtttgctgcgcgtg
ctgcaggagcgttgcgtgcaaccgctgggcagcagcgagttgtttccggtggacattcgg
gtgatttccgcaacccactgttcgctgcgcgaacaggtgcagagcgggcgtttccggcag
gatttgtactaccgcatcagcggcttgaaccttgaattgccgcccctgcgcgaccgtacc
gacaaggcggaactggtgcagatgatctggcagcagcatcgcgaaccccagcagacggcg
ggcttcgagtcgtcggtgttggcgttgttcgagcggcatccgtggccggggaatttgcgt
cagttgagcaatgtgattcaggtggcgctggcgctggcggatgacgagccgatttctacc
gagcatctgccggaggacttctttgctgatctggagctcgccgatctggagatgcagagc
gagaacagcgagcgggtgacggcgttcaatcgtaaggccgcgctagatacgccggaggag
ttgaacgagctgctgcaggcggccggggggaatatttcgcagctggccaagcggctgggg
gtgagtcggaataccttgtacaaacggctgcgcgaacagggtttctga
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