Pseudomonas bambusae: AAEO81_26065
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Entry
AAEO81_26065 CDS
T11347
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pbab Pseudomonas bambusae
Pathway
pbab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AAEO81_26065 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbab03400
]
AAEO81_26065 (recC)
Enzymes [BR:
pbab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AAEO81_26065 (recC)
DNA repair and recombination proteins [BR:
pbab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AAEO81_26065 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WZO60940
LinkDB
All DBs
Position
complement(5775180..5778665)
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AA seq
1161 aa
AA seq
DB search
MPVTSNLNPGFMVVHGNRLDELRSLVVSWMRRYPLTPLENEVALVQSNGIAQWLKLALAE
DAQDDDQGGCGIAAAIDVQLPGSFMWQLYRAVLGKDEIPETSLLDKAPLTWRLMRLLPAL
IDQPHFEPLQRFLTADTDLRKRYQLSERLADLFDQYQVYRADWLEDWAAGRHQLKNVRGE
AKPLKPENCWQAELWRALLHDVGAEGMAQSRAGVHQRYMERINTLTEAPAGLPARVIVFG
ISSLPAQALEALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLRHEYKRQSRKAGMPVVL
NPDALHQHAHPLLAAWGKQGRDYINLLDSHDDPNSYRSIFRDGRIDLFSDGDPQTILSQL
QDDILELRPLSETRECWPAVDIKKDRSIRFHVAHSAQREVEVLHDQLLARFSANADLRPR
DVIVMVPDIDSYAPHIRAVFGQLDRDDRRFIPFTLADQGQRGRDPLLIAVEHLLKIPDSR
FPVSEILDLLDVPALRARFGIDERDLPTLHRWIEGAGVRWGLNAKQREGLGLPEALEQNS
WHFGLRRMLLGYAVGAGIAYHDIEPYDEIGGLDAALIGPLVALIDALQVAHAELSQPATP
PVWGTRIQALMQLFFTADSEHDDYLLGQLETLRESWLETCETVGLLEELPLTVVREAWLA
GLDQGKLSQRFLAGSVNFCTLMPMRAIPFKVVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWRLAD
AVEPEDAKRRDPGQQLLHKLTLEHPLQPFSAKYFQENLEYFSFAREWQVLHEAAVQSGEI
KALEKYEQEEPLSLMQLQDFLRNPVKHFFSQRLKIFFEVAEAPLADEEPFVLDALERYGL
SDSLLQAALLDLESADQSLKAQAVRLQASGLLPMAGFGTLLQDELIEPLPDLVQRYHDLL
FKWPERLHSALPVSHEHQHVALDGWLDGLYQNMQGELLALTAVPNKLIGKGGRKWHRLTK
PWVNHLVACACDLPLTTALVASDETLLLPPLDKAKATSTLNDLLLAWQHGMQRPLPVAVK
TAFAWLGEADDVKAEAAARKTYDGDGQNIAGEHAESTALARQFPTFDTLLDSEEFVGWCE
SLYKPIYEAPWQSLSSVEAGA
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgacatccaaccttaaccctgggttcatggtggttcatggcaatcgcctggat
gaactgcgtagccttgtggtgtcgtggatgcggcgttacccgctgaccccgctggaaaac
gaagtcgcgctggtacaaagcaacggtatcgcccagtggctgaagcttgccttggcagag
gatgcacaggacgacgatcaaggcgggtgtgggattgctgccgccatcgacgttcagctc
cccggcagtttcatgtggcagctttaccgcgcagtgctggggaaggatgaaatccctgaa
acctcgctgctcgataaagccccactcacgtggcgtttgatgcggttgttacccgcattg
atcgaccaaccgcatttcgagccgctgcagcgctttctcaccgccgacaccgatctgcgc
aagcgctatcaattgtccgagcgcctggcggacctgttcgaccaataccaggtataccgc
gccgactggctggaagactgggctgcagggcggcatcagttgaaaaacgtcaggggagag
gccaaaccgctcaaacccgaaaactgttggcaggccgagttatggcgagcgctgcttcat
gatgtcggtgccgaggggatggctcagagccgtgccggggtgcatcagcgctatatggag
cggatcaataccctgaccgaggcccccgcaggcttgcccgcccgggtcattgtgtttggt
atctcctcgctgcctgcccaagcgcttgaagccctcgccggtctgtcacgtttcagccaa
gtgctgctctgcgtgcacaacccctgccgtcaccactgggcggatatcgttgctgacaaa
gacttgctacggcacgagtacaaacgtcaatcgcgcaaggctgggatgccggtggtactc
aacccggacgccttgcaccagcacgcccatccactgctcgccgcatggggcaagcagggc
cgcgactacatcaatctgctcgacagccacgacgaccctaacagctaccgctcgatcttc
cgcgacgggcgtatcgatctgttcagcgacggcgacccccaaaccattctcagccagtta
caggacgacattctcgaactgcgaccgttgagtgaaacccgcgagtgttggcccgccgtc
gacatcaagaaagaccgctcgatccgcttccacgtggcccacagcgcccagcgcgaagtg
gaagtgctgcacgaccagttgctcgcgcggttcagcgccaatgctgatctgcgccctcgc
gatgtgatcgtgatggtcccggacatcgacagctacgccccgcacattcgtgccgtgttt
gggcaactggaccgtgacgatcgccgcttcattcctttcacactggcggaccagggccag
cgcggtcgtgaccctttactgattgccgtcgaacacctgttgaagatccccgacagtcgg
tttccggtcagcgagatcctcgacctgctggacgttcccgccctgcgcgcacgtttcggc
atcgacgaacgcgacctgccaaccctgcatcgctggatcgaaggcgcaggcgtgcgctgg
gggctgaatgccaagcaacgtgagggtttgggccttcctgaagcccttgaacagaacagc
tggcatttcggtctgcgacgcatgctgttggggtacgccgtgggtgcaggcattgcctac
catgacatcgaaccctatgacgaaatcggcggcctggacgccgcgctcatcggcccgttg
gtcgccttgatcgacgcccttcaagtcgcccacgccgaactgtcgcagcctgccaccccg
ccggtctggggcacgcgtatacaagcgctgatgcagctgtttttcacggcggacagcgag
cacgacgactatctactcggccaactcgaaaccctgcgcgaaagctggctggagacctgc
gaaacggtcggcctgctggaagaactgccgctaacggttgtgcgcgaggcgtggctcgcc
gggctggatcaaggaaaactctcgcagcgcttcctcgcaggctccgtcaacttctgcacc
ttgatgccgatgcgtgcgatcccgttcaaagtggtctgcctgttgggcatgaatgacggc
gattacccccgcgcacaaccgccgctggactttgacttgatgggcagcgattatcgcccc
ggcgaccgttcccgtcgcgaggacgaccgctatctgctactcgaagcgcttctgtccgcc
cgagatcagctctacatcagttgggtcggacgcagcattcgtgacaactctgaacgtccg
gcgtcagtgctcattggccaactacgtgatcatttggccagcggttggcggttggcagac
gctgtcgaacccgaggacgcgaagaggcgcgacccaggtcagcaattgctgcacaagctg
acccttgaacaccctctgcaaccgttcagcgccaaatacttccaggagaatctggagtac
ttcagctttgcccgtgaatggcaggtcttgcatgaagcggcggtccagtcgggcgaaatc
aaagcactggaaaagtacgagcaagaagagccgctcagcctgatgcagctgcaagatttc
ttgcgtaacccggtcaaacacttcttcagtcaacgtctgaaaattttcttcgaagtggca
gaagcgcctttggccgacgaagagccttttgtgctcgatgctcttgagcgctatggattg
agcgatagcctgctgcaagcggcgctcctggaccttgaaagcgctgaccaatccctcaaa
gcccaagccgttcgcttgcaggccagtgggctgttgccgatggctggattcggcacgctc
ctacaggacgagttgatcgagccgctgcccgacctggtgcagcgctaccacgacctgttg
ttcaaatggccggagcgcctgcacagcgcgttgcccgtgagccacgaacatcaacacgtc
gccctcgacggttggctcgatggcctctatcaaaatatgcaaggtgagctgcttgctctg
actgccgttccaaacaagctcatcggcaaaggtggtcgcaagtggcatcgcctgaccaag
ccgtgggtcaatcatctggtggcgtgcgcctgcgatttgccgctgaccaccgcactggtg
gctagcgatgaaaccctgcttttgcccccgttggataaggcaaaagccacaagcaccctc
aacgatctgctgctcgcctggcaacacggcatgcagcgcccgttacccgtcgccgtgaag
actgcgtttgcctggctcggtgaagcggacgacgtcaaagccgaagccgccgcccgcaaa
acctacgacggcgacggccagaacatcgcaggcgagcatgccgaaagcacggcgctggct
cggcaattccccacgttcgatacgctgctcgacagcgaagagttcgtcggctggtgtgag
tcgctgtacaaaccgatttacgaagcgccttggcaatccctgtccagcgtggaggccgga
gcatga
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