Pseudomonas bambusae: AAEO81_26200
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Entry
AAEO81_26200 CDS
T11347
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pbab Pseudomonas bambusae
Brite
KEGG Orthology (KO) [BR:
pbab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbab03400
]
AAEO81_26200 (radA)
DNA repair and recombination proteins [BR:
pbab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AAEO81_26200 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
ChlI
DnaB_C
Lon_C
AAA_16
SLFN-g3_helicase
GvpD_P-loop
AAA
nSTAND_NTPase5
RecA_N
AAA_22
Rad51
nSTAND3
AAA_14
AAA_5
AAA_24
NTPase_1
ABC_tran
MCM
AAA_29
PAXNEB
DUF7129
Motif
Other DBs
NCBI-ProteinID:
WZO60961
LinkDB
All DBs
Position
complement(5811135..5812505)
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AA seq
456 aa
AA seq
DB search
MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLTETMIESGGAAAPAGRGGWAGQQAQIK
TLAEVSVEEIPRFSTNSAELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCAIAERMP
ALYVTGEESQQQVAMRARRLSLPQDKLRVMTETSIETIIATARVEQPKVMVIDSIQTIFT
EQLQSAPGGVAQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEAVAGSVVMATW
EGTRPMLVEVQALVDDSHLSNPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRALPGDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKESPPGLTVIGVTRLDQALDALFEE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaaacgcatgtatggctgcaccgagtgcggcgcgacctttcccaaatgg
gccgggcaatgcggcgaatgcggcgcctggaatacgctgaccgaaaccatgatcgaaagc
ggtggcgcagcagccccggcagggcgtggcggttgggccgggcagcaggcacagatcaag
accctcgccgaagtcagcgttgaagagattccgcgtttttccaccaattctgccgaactc
gaccgcgtgctcggcggcggtctggtggacggctcagtggtgttgatcggtggcgacccc
ggcatcggtaagtcgacgatcctgctgcaaaccctctgcgccatcgccgaacgcatgccc
gcgctgtacgtcaccggcgaggaatcgcaacagcaggtcgccatgcgcgcccgccgtttg
agcctgccccaggacaaactgcgggtcatgaccgaaacctccatcgaaaccatcatcgcc
acggcccgcgtcgaacagccgaaggtcatggtgatcgattcgatccagaccatcttcacc
gagcagctgcaatcggcgcccggcggcgtggcacaggtgcgggaaagcgcggcgctgctg
gtgcgttacgcgaaacagagcgggacggcgatctttctcgtcggccacgtgaccaaagag
ggcgcactggccggccctcgcgtcctcgaacacatggtcgacaccgtgctgtatttcgaa
ggcgaatcggacggacgtttgcgtttgctacgggcggtgaaaaaccgtttcggcgccgtc
aacgagctgggcgtgttcggcatgaccgacaagggtctgaaagaagtctcgaacccgtcg
gcgatttttctgacccgtgcacaggaagcggtcgcaggcagtgtggtcatggcgacgtgg
gaaggcactcgcccgatgctggtcgaggtgcaggcgctggtggatgacagtcacctctct
aatccacgtcgcgtgacgttggggctggatcagaaccggctggcgatgctattggcggtc
ctgcaccggcatggcgggattccaacgcacgatcaggacgtttttctgaacgtggtgggc
ggggtgaaagtgctggaaacggcatcggacctcgcgttaatggcggcggtgatgtcgagt
cttcgcaaccgggcgttgccgggagacttgctggtgtttggcgaagtggggctgtcgggc
gaagtgcgccctgtgccgagcggccaggagcgtttaaaggaagcggccaagcacggcttc
aaacgcgccatcgtgcccaagggcaatgccccgaaagaatcgccaccggggctgaccgtg
ataggcgtgacccggttggatcaggcgttggatgcgttgtttgaggaataa
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