Paenibacillus barcinonensis: HUB98_05085
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Entry
HUB98_05085 CDS
T06922
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pbac
Paenibacillus barcinonensis
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbac03009
]
HUB98_05085 (der)
Ribosome biogenesis [BR:
pbac03009
]
Prokaryotic type
GTPases
HUB98_05085 (der)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
AIG1
Dynamin_N
RsgA_GTPase
Roc
cobW
ABC_tran
TniB
SRPRB
MMR_HSR1_Xtn
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QKS55756
LinkDB
All DBs
Position
complement(1168808..1170130)
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AA seq
440 aa
AA seq
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MARPVVAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGITRDRIYGIGEWNGKAFSIIDTGG
IEIDGEDVIMKSIRMQAELAIEEADVIVFMCDAKAGITQSDEEVAEMLYRSGKPIVVAVN
KVDNIGRSELIYEFYGFGFGDPIGVSGSHGTGIGDLLDAIVEKLPELEEETYDDDVIRVA
LIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDGQRYVLIDTAGMRKRGKV
YETTEKYSVMRAMRAIERADVVLIVINGEEGIIEQDKHIAGYAFEAGKASLFVVNKWDIV
DKTDKTMKEFETKIRDHFLFMTYAPIVFLSALTKQRLQKLLPVVQRVAEQHSLRVQTHLL
NDVVSDAVAINPPPTDKGRRMRINYVTQVAVKPPTMVIFVNDPELMHFSYERYLENKIRA
AFDFEGTPIRIFTRRKSDEG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaccagttgtggcaattgtcggccgaccgaatgtgggtaaatccaccattttc
aatcgaattatcggcgacagactggccattgtggaagacaagccgggcattacccgcgac
cggatctacggaatcggtgaatggaacggtaaagcattcagcattattgatacaggcggt
atcgaaattgacggtgaagacgtcataatgaagtccatccgtatgcaggcggaactggcg
atcgaggaagcggatgtgatcgtgtttatgtgtgatgccaaagcaggcattacacagtct
gacgaggaagttgcagagatgctttatcgctcgggcaagccgatcgttgtagccgtgaac
aaagtggataacattggacgcagtgagctgatttatgagttctatggcttcggttttggc
gatccgattggtgtatccggtagtcacggtacaggcattggtgatttgcttgatgccatt
gtggagaaattacctgaacttgaggaagagacatacgatgatgatgtcattcgtgtagct
ctgatcggacgacctaatgtcggtaagtcttcactggtaaacgcaattttgggtgaggaa
cgtgttattgtcagcgacgtagctggaacaacccgtgatgcaattgacactccttttgaa
aaagacgggcagcgttatgtgctgattgatacggctggtatgcgcaagcgcggtaaagta
tatgaaacgacggagaaatacagcgtgatgcgtgcaatgcgtgctatcgaacgtgctgat
gttgtgctgattgttattaatggcgaagaaggcatcattgagcaggacaagcatattgca
ggttatgcctttgaagcgggtaaagcttcattgtttgtggtgaacaaatgggatatcgtg
gataaaacagataaaacgatgaaggaatttgagacgaaaattcgggaccacttcctcttt
atgacgtacgctccgattgtctttttgtccgcactgacaaaacaacgcttacaaaaattg
ctacctgtggtacagcgtgtagcagaacagcattcactgcgggttcagacacatctgctt
aacgatgttgtatccgatgctgttgccattaatccgccaccaacggataaagggcgtaga
atgagaattaactatgtgacacaggtagcggttaaaccgccgaccatggttatttttgtg
aacgaccctgaattgatgcacttctcgtacgagcgttatctggaaaacaaaatccgtgca
gcgtttgattttgaaggcacaccaattcgtatatttactcggaggaagtccgacgaaggt
tag
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