Paenibacillus barcinonensis: HUB98_05435
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Entry
HUB98_05435 CDS
T06922
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03030
DNA replication
pbac03430
Mismatch repair
pbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUB98_05435
03430 Mismatch repair
HUB98_05435
03440 Homologous recombination
HUB98_05435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbac03032
]
HUB98_05435
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_05435
Enzymes [BR:
pbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUB98_05435
DNA replication proteins [BR:
pbac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUB98_05435
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUB98_05435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
HTH_HVO_0163_N
Motif
Other DBs
NCBI-ProteinID:
QKS55824
LinkDB
All DBs
Position
complement(1244683..1247826)
Genome browser
AA seq
1047 aa
AA seq
DB search
MHSDTSNPSTSMAIDSVTKYQQYIDEAEKANMQTICFSEHGNVFNWVKKKQSIEEKGMKY
IHANEVYLTEHNDKESGLIRDNYHYMLIAKNLEGAQELNKLTSLSNNKDDGHYYYNPRIT
FEELFNTSDNIIMTSACLASPLWRAIKNDNKQMMNKFMDFFVSNKHRMFFEIQYHTHPEQ
KLFNQHLHSLSIETGIPLIAGTDTHALNRSHADARKILMKAKGATYGDEDAFDLTFKTYP
EVVKMFEEQSALPRNVYLEAIHNTNVMADMIEEFKIDSSPKYPKLHDDSEKVFKEKINVG
VIERGINKFDKVKKDTYFKRIREEFDTYKKVGAIDYMLLQKDVVDWAHSNDIYQGYGRGS
VNGSLIAYLLKITEMDSIKHKLNFFRFLNPERISLADIDLDWPPSKRQDVIDYVATIPGI
HFSEIITFNTVALKGAIREVGRALGMDLAIVDAIAKSVFKDDKKVDRVDPKYLDMYPELF
KYVELVQGVIVSIGSHPSGYIVSPVSLEDNIGLCYTKESKYPVSQINMKELDGLNYVKLD
ILGLDNNEIINETCKLAGIERLTPDNMDVDDKDVWNSIRESGLGIFQWESNSAQAYLKDL
LSEETIHKIEEQNDMFSYIELFSIGNGAIRPSGDSYRQALANGIFKDHGHEALNNFLKST
IGYLVYQEQIMNFLVEFCEFTMAESDSVRRGLSKKEGTEKFLPEIRKRFVQKMNMDYGET
EEDALAVLEPFLQVIDDAQRYGFSDNHSNPYSHIGYGNGYLRHYYPLAFLTVMLNINNDN
IEKTGQIINYAKTRGIEVSPIKFGKSNADYSFSEGDNTIYKGLKSIKYLNEKIAEELLSL
SKNTYASFVELLVDLNEKTSVNSRQTDILTRLGFFREFGDISLLVTLHKEFSSGRSQYKK
TYVEKTKLKRIADLIDEENRIRTENDYSKVMPNEEVMFQKEMLGYSEAVFPDIESGWCVV
TDLDLKYSPKLTLYNLRNGDERVFKMDKKTFNVKDKALKIEKGDLIEITSHKKKPRQVPD
GNGGFRATDQTDVWITGYNKYKNKENA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
ttgcattcagatactagcaatccatcaacgtcaatggctatagactctgtgactaaatat
caacaatacatcgatgaagcagaaaaagctaacatgcaaacaatatgtttctctgaacac
ggtaatgtttttaattgggtcaagaagaagcagtctatcgaagagaaaggtatgaagtac
attcatgcgaatgaggtatacctcactgagcacaatgacaaagaaagtggtttgattcgc
gacaattatcattacatgcttattgcaaagaatcttgagggagcgcaggaattaaacaaa
ctgacttcactctcgaacaataaagatgacggacattattattataatccaaggattact
tttgaagaactgttcaatacttcggataatattatcatgacatctgcttgtctagcatct
ccgttatggagagctattaaaaatgacaacaagcagatgatgaacaaatttatggatttc
tttgttagcaataagcatagaatgttttttgagattcaatatcacactcacccagagcaa
aagctattcaaccagcatctacacagtttatcaattgaaacaggtataccgcttattgca
ggaacagacactcacgccttaaacagatctcatgctgatgcacgtaagattctaatgaag
gctaagggtgcgacatatggagatgaagatgcattcgatctaacctttaaaacatatcct
gaagttgtcaaaatgtttgaggagcaatcggctttacctagaaatgtttatcttgaagct
atacataatacaaacgttatggctgatatgatcgaagaatttaagattgattcgtcgcca
aagtatcctaagctgcacgacgactcagaaaaagtgtttaaagaaaagataaatgtcggt
gtaatcgaacgaggaattaataagtttgacaaagtaaaaaaagatacatattttaaacgg
attagagaagagtttgatacatataaaaaggttggagcaattgactatatgctcctacag
aaagatgtagttgattgggcgcatagtaatgatatttatcaaggatatggtcgtggatca
gttaacggaagcttgattgcgtatttattgaaaattactgagatggatagtatcaaacat
aagctgaactttttccggttcttgaatccagagcgtatctcgcttgccgatattgacttg
gactggcctccatctaaaaggcaagatgttattgattacgtagcaacaattcccggtatt
catttctcagagattatcacctttaacactgtggcactaaaaggagcaattagagaagtt
ggaagggctctaggtatggatcttgcgatagtagacgccattgctaaatcagtattcaaa
gacgataagaaggtcgatagagtagatccgaagtatctcgatatgtatcccgaattattc
aaatatgttgaattggtgcaaggagttatagtaagcataggatctcatccttctggctac
atagtttctccagtaagtctcgaagataacattggtctttgttatacaaaagaaagtaag
tatccagtaagtcagatcaatatgaaagaactcgatggactcaattatgtaaagttggat
attttgggtttggacaacaatgaaattatcaatgagacatgtaagctagctggaattgaa
cggcttacaccggacaatatggatgttgatgataaagatgtctggaattccatacgagag
tctggtttgggaatattccaatgggaaagtaattctgcccaagcatatctaaaagatcta
ctaagcgaagaaacaatacataagatagaagaacaaaatgatatgtttagttatattgag
ctattctcaattggcaatggagcaattagaccatcaggagactcatacagacaagctttg
gcaaatggcatattcaaagatcacggtcatgaagcattgaataattttctgaagagtact
attggatacttagtatatcaagaacaaatcatgaactttctagtagagttctgcgagttt
acaatggcagaaagcgatagtgttcgaaggggattgagtaaaaaagaaggaacagagaag
tttctgccagagataaggaagcgttttgtgcaaaaaatgaatatggattacggagagacc
gaagaagatgcgcttgctgtcttagagccttttttgcaggtcatagatgatgcacagcgt
tatggattctccgataaccactcaaatccttactctcacatcggttatggaaatggatat
ctaagacactactaccctctagcctttcttactgtgatgttgaatataaataatgacaac
atagaaaagacgggtcaaataattaactatgctaaaacaagaggtattgaggtgtcacca
ataaaatttggaaagtctaacgctgattactcatttagtgagggcgataatactatctac
aaaggtttaaaatctattaaataccttaatgaaaagattgcagaagaactattatcctta
agtaaaaatacatatgcatcatttgttgaattgctagtggatttaaacgaaaaaacatcg
gtcaacagtcgtcaaactgatatattgactcgtcttgggttctttagagaatttggtgac
attagtttattggtgacattgcacaaagagttctcaagtggaagatctcaatataaaaaa
acatacgttgagaagactaaacttaagaggatagcggatctaattgatgaagaaaatagg
attcgcactgaaaatgactactccaaagttatgccaaacgaagaagtgatgttccaaaaa
gaaatgctagggtactccgaagctgtatttcccgatatagaatcgggttggtgtgtagtt
accgatttagatcttaaatacagtcccaagcttaccttatacaatcttcgtaatggcgat
gaacgtgtctttaaaatggacaagaaaacatttaacgtcaaagataaagcgttgaaaatt
gagaaaggagatttaattgaaataacgagccataagaaaaaaccaagacaggtcccagac
ggaaatggcggtttcagagccacagatcagacagatgtttggatcacaggttataacaag
tacaagaataaggagaatgcatag
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