Paenibacillus barcinonensis: HUB98_06265
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Entry
HUB98_06265 CDS
T06922
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUB98_06265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_06265
Enzymes [BR:
pbac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HUB98_06265
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUB98_06265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
HHH_RecD2
AAA_19
SH3_13
UvrD_C_2
Viral_helicase1
PhoH
PIF1
AAA_22
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QKS55985
LinkDB
All DBs
Position
complement(1344107..1346347)
Genome browser
AA seq
746 aa
AA seq
DB search
MSIIELKLTPEKMMFPRKEADNKNDFRIYSCNTNSPNVLLNSYGNLSVKGVMQRLELGVE
YEAQIELEKVDAKYGASYNVLSIYQDVPETMEGQKAFLATLMTDLQLKEVYKTYPNEDIV
KLIVDNKFEYEKVKQFGSKTYNKIRDRILENIAYRDVLSRLGKYGITYDIILKLEKTFGS
KELAIQKIEDNPYELTQLSGFGFKRADKIAQLMGFKKDDPHRIKYGIRFTIDDNQQQGHT
YMLKDELLRNASEKLELAEVMIENFLYDTDGLVFVDDKVSLTRTYNAEKYIAKRLAEMLE
NGISLNFDPDKYILEIEATYKEDIPKGLTYQQKDFFRSIQKYSVNLLIGYAGTGKSKLQK
FLVDLLNKLGLTYVLLSPSAKAAKVTRTYTGVNAQTIHRRIGFGMDKEEEMMLEIHEDFV
IIDESGMTDVFILSSLLSKIKNPNTRILFVGDDFQLLSVQAGNFLHDAIVSGAIPMTKLD
IVFRQGDGGILDVATKIREGKQIVNNDFEGKQLFGNDFLLHCVDQVQIEKGYKHYYNLLL
NTYKPEDIMVLSPTKKGKLGTVELNKHIQEQVNPFDSTKKQHEYGYDGLIRVGDYILNTV
NMYQIANMSEEGTDIVNGDSGKVIDIKLEDDKKNSDDELAESERKGIIIQFDDQLVRLDI
GLAAQLLSAWALTIHKSQGSSSEATLIVVDRSNKFQISANLIYTAITRSVSKCIFLTQAE
TLNFAIRKVESKRRNTHLCNLLREIN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
ttgagtattattgaattgaagttaacaccagagaaaatgatgttcccaagaaaagaagca
gataacaaaaatgattttaggatatactcatgtaacacaaatagcccaaatgtgctttta
aactcatacgggaatcttagcgttaaaggggtcatgcaacgactagaattaggtgtggag
tatgaagctcaaattgaacttgaaaaagttgatgcaaaatatggagcaagttataacgtg
ttatcgatatatcaggatgttcctgagacaatggagggtcagaaggcgtttttagcgaca
cttatgacggatctacagttaaaggaagtatataagacctatccaaacgaggatattgtt
aagctgattgtagataataaatttgaatatgagaaagttaaacagtttggatcaaagaca
tataacaagataagagatagaattcttgagaatatagcctatagagatgtattgagtcga
ttgggaaagtacggcataacatatgacattattttaaaacttgagaaaacatttggatca
aaggaattagccatccagaaaattgaagacaacccatatgagcttactcaattatctgga
tttggatttaaaagagctgataagatagcacagttaatgggtttcaagaaagatgatcca
catagaatcaaatatgggataagattcaccattgatgacaaccaacaacaaggacacaca
tatatgttaaaagatgagttgctgagaaacgcttctgagaaactagaacttgctgaagta
atgattgagaattttctatatgatacagatggattagtatttgtagatgacaaagtttct
cttactagaacttacaacgctgaaaagtatatagcgaaacgattagcggaaatgttggaa
aatggaatttcactaaactttgatcctgataagtacattctggagattgaagcaacgtat
aaggaagatatacccaaaggacttacatatcaacaaaaggatttctttagaagtattcag
aaatattcagtcaacttacttattgggtacgcaggaacaggaaaaagtaagcttcaaaag
ttccttgtagatttgctaaataaattaggactcacatatgtattactatccccatctgca
aaagcagcgaaagttactcgtacctacacaggagtaaatgctcaaactatacatagaaga
attggttttggtatggataaggaagaagagatgatgttagagatccatgaagactttgtg
attattgatgaatccggtatgaccgatgtatttatactatcatcattactctctaagatt
aaaaatccgaatacaagaatattattcgttggtgatgattttcagttattatctgtacag
gcaggaaactttcttcacgatgctattgtaagcggagcaattccaatgactaaattggac
atcgtgtttagacaaggtgatggaggcatccttgatgttgccactaagataagagaaggt
aaacaaattgtaaataatgactttgaaggcaagcagttgtttggaaatgactttttactg
cactgtgttgatcaggtacagattgaaaagggatataaacactattataatttgttgttg
aatacttataagcctgaagatattatggtactatctccaactaagaaagggaagttagga
accgtagaattaaataagcacatacaagagcaagtcaatccatttgattcaacaaagaaa
caacatgaatatggatatgatggtttaattagagttggagactacatccttaatacagtt
aatatgtaccagatagcaaacatgtctgaagaaggaacagatatagtaaatggagattca
gggaaagtgatcgatataaagctggaagatgataaaaagaatagcgacgatgaattagcg
gagagtgaaagaaaaggaattataattcagtttgatgatcaactggttagattagacata
ggtttagcagctcaattactatctgcttgggcattaacgatacataagagtcaaggaagt
tctagtgaagcaacattaatagtagtggatagatccaataagtttcagattagtgccaac
ttgatttatacagcaataacgagaagtgtatctaagtgtatattcttaactcaggcagag
acactaaattttgccatcagaaaagtagaaagtaagagacgcaatactcatctgtgcaac
ctgctaagagagattaattaa
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