Paenibacillus barcinonensis: HUB98_06600
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Entry
HUB98_06600 CDS
T06922
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac00300
Lysine biosynthesis
pbac00470
D-Amino acid metabolism
pbac01100
Metabolic pathways
pbac01110
Biosynthesis of secondary metabolites
pbac01120
Microbial metabolism in diverse environments
pbac01230
Biosynthesis of amino acids
Module
pbac_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pbac_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HUB98_06600 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HUB98_06600 (lysA)
Enzymes [BR:
pbac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HUB98_06600 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QKS56045
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All DBs
Position
complement(1411056..1412387)
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AA seq
443 aa
AA seq
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MYLHGTSRINEQGHLEIGGVDVTDMKEQFGTPLYVVDEQLVRERCREYMEAFRASGLGFQ
VAYASKAFCVMAMCALAAEEGLSLDVVSDGELFTALQAGFPAERIHFHGNNKTLEEIEMA
LDAEIGCFVVDNFNELHLLQAVAADKNRKVNILLRVTPGVEAHTHEYISTGQTDSKFGFD
IGNGTAFEAIELASNQPNLVLLGVHSHIGSQIFEVEGFQMAVQRVAEFAASVYERLNVAF
KVVNLGGGFGIRYIDGDTPLEVAQYVKAITDAVKNHFAQIGYAVPEIWVEPGRSIVGEAG
TTLYTVGTSKDIPGVRKYVAVDGGMTDNPRPALYESKYEAVLANRANEAATETVSVAGKC
CESGDMLIWDLDLPKVESGDLLAVACTGAYNYSMASNYNRIRRPAVVFVKDGQGDVVVRR
ESYQDIIQNDLVPARIGKQPVTR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacacggtacaagtagaataaatgagcaaggtcatctggagattggtggagta
gacgtaacagatatgaaggaacaattcggcacaccgctctatgttgtggacgagcaattg
gttcgcgagcgctgcagagaatacatggaggcattccgcgcttccggtctgggcttccag
gttgcgtatgcgagtaaagcattctgtgtcatggctatgtgtgctcttgcagctgaggaa
ggtctttccctggatgtcgtatctgacggggagctgttcacagcgttgcaggcgggattc
cctgccgagcgtattcacttccatggcaataacaaaacgctggaagagatcgaaatggca
ctggatgccgagatcggttgcttcgtagtagataactttaacgagttgcacctgcttcaa
gctgttgcagcggataaaaatcgcaaagtgaacatccttctgcgtgtgacgccaggtgtt
gaagcacatacgcatgagtatatctcgacaggacaaaccgactcgaagttcggctttgat
attgggaacggcacagcctttgaagcgattgaactggcttctaatcagccaaaccttgta
ttgcttggtgtgcattctcacatcggttcgcaaatctttgaggtggaaggtttccagatg
gcggttcaacgtgttgctgaatttgcagcaagtgtgtatgagcgcctgaacgttgctttt
aaggttgtaaaccttggtggcgggttcggcattcgttatattgacggagacacgccgctg
gaagtggcacagtacgtgaaggccattacggatgcagtgaaaaatcattttgctcaaatc
ggttatgcagtgcctgaaatctgggttgaaccgggtcgctcgatcgtaggtgaagcaggt
acaacactttacacggttggaacaagcaaagacattcctggtgtgcgtaaatatgttgcg
gtagacggtggtatgacggataacccgcgtcctgcactgtatgagtccaaatacgaagcg
gtgctggctaatcgtgcaaacgaagcagctacagaaacggtttctgtagctggcaaatgc
tgcgagagcggtgatatgctgatctgggatctggatctgccaaaagtggagagcggcgac
ctgctggctgtggcctgcacaggcgcatataactactcaatggcaagcaactacaaccgg
attcgtcgtccagctgttgtgtttgtcaaagacggtcaaggtgatgttgtcgtgcgtcgc
gagtcgtaccaggacattatccagaacgacctcgttccagcgcgtattggcaaacagccg
gttactcgttga
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