Paenibacillus barcinonensis: HUB98_07855
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Entry
HUB98_07855 CDS
T06922
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUB98_07855 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_07855 (ung)
Enzymes [BR:
pbac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HUB98_07855 (ung)
DNA repair and recombination proteins [BR:
pbac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUB98_07855 (ung)
Prokaryotic type
HUB98_07855 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QKS56266
LinkDB
All DBs
Position
complement(1674345..1675013)
Genome browser
AA seq
222 aa
AA seq
DB search
MFGNDWDEVLQQETQADYFNNIRYALAAEYKTQTVYPPKEDLFSALKLTPYHKVKAVIIG
QDPYHGAGQAHGLSFSVRPGVRVPPSLKNIYKELQNDLGVPVPRHGSLIHWAEQGVLLLN
AVLTVREGQPNSHQALGWQTFTDAVIRELNERTEPMVYMLWGSHAQKKGAFINRDKHLVL
ESTHPSPLAAHRGFLGSRPFSKANEFLVSQGIKPIDWTIPEN
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggaatgattgggatgaggtgctgcagcaggagacgcaggctgactactttaac
aacatccgttatgcacttgctgccgagtataaaacacagaccgtttatccacctaaggag
gatttgttctcggctttgaagctgactccgtatcacaaggtcaaagctgtaatcattggt
caggatccttatcatggtgcgggtcaggcgcacggactaagcttttcggtcagaccgggg
gtgcgcgttccgccttcattaaaaaatatatacaaggaacttcagaatgatctaggggtg
cctgttcctcggcatggttcacttattcattgggcagagcaaggtgtgctgctgctcaat
gcggtgctgacggttcgggaaggacagcctaactcacaccaggcgctcggttggcagacg
ttcacggatgcggtcattcgggagctgaatgaacgtacggagcctatggtgtacatgctc
tggggaagtcatgcgcagaagaagggtgcttttattaatagagacaagcatctggttctg
gaatcgacacatccgagtccgctggcggcacatcgcggttttctgggcagcaggcctttt
tccaaagccaatgaatttctcgtctcccaaggtattaaaccgatcgattggacaatacct
gaaaactag
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