Paenibacillus barcinonensis: HUB98_08185
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Entry
HUB98_08185 CDS
T06922
Name
(GenBank) PASTA domain-containing protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac00550
Peptidoglycan biosynthesis
pbac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUB98_08185
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbac01011
]
HUB98_08185
Peptidoglycan biosynthesis and degradation proteins [BR:
pbac01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HUB98_08185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-ProteinID:
QKS56316
LinkDB
All DBs
Position
complement(1744622..1746970)
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AA seq
782 aa
AA seq
DB search
MVKRIKMRTLLIGGCITLFFLVLITRIFFIQVVNGGDWQERAAGLIEREQTIKAARGTIT
DRNGNVLATDSPAYTVSVNPLLINQLGIEDEVTQKLSALLKKNESEMRALVTAKNSDGKF
FQQREVRSEGYKISPELAAKVKELRQQLQDEYKAGNAIVMTQESKRFYPEQTLASHVLGY
MSRDGKAVNGLEVSYNDALTGKDGYLNYQKDAKGIKLPGSQDSYLPPQNGKNLKLTIDDT
IQLYIEEAMKETVAKYNPLSMTVIAADPNTMEILGMANWPTFNPNTYASTPDQKNFINHA
TQSIYEPGSTFKIVTLAGAVEEKLFDPNATFESKPTRIGGFTISDNGHSYGRISYLEGVK
RSSNIAFVNLGYNMLGGERLRHYIDQFGFGKKTGIDLPSEAASPIRPLIYKSEIATAAYG
HGLVQVTPIQQLAAISAVANGGKLLQPHLVKEIINPNDGSTEVIKPKVVRQVITKESAKL
VSGYLEQVVADQTIGTGRNAYIEGYRVAGKTGTARKVINGQYSKSKDVVSFIGFAPVNNP
KIAMLIVIDQPDGTNIGGGTAAAPVFKKVVSKTLQYMGVPKDTAKSTDKKSKEAAVVQAK
APDLSGKTAKQARSQLLNLGIAYVTLGQGENVIRQYPQAGASMNPGQRVYLLTEESSKMK
VPDLTGESLRDALEILSLMKVGVTTKGEGYVVKQKEQVSGEQRTVQLTLQTAKAAVTGIP
DEAPDSSDPDAEKKDETAKTNDKGGTQEKGDSGATESQSNSQKQTTQDATSDSPANKGAS
LP
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacgaataaaaatgcgtacattgttaatagggggatgtattaccctctttttt
cttgtactcataacgcgtatatttttcattcaggtagtgaatggtggcgattggcaggaa
cgggctgcagggctgattgagagggaacagacgatcaaggcggctcggggaacaattacc
gatcgtaatggcaatgtgctcgccacggattcaccggcctacacggtctcagtgaacccg
ctgttgattaatcaattgggcattgaagatgaagtgacccaaaagctgtccgcgttgctc
aaaaaaaatgagagtgaaatgcgggctcttgtgacagcgaagaatagtgatgggaagttt
tttcagcaacgtgaggtgcggagtgaagggtacaaaattagccctgagcttgcagcaaag
gtcaaagaattgcgtcaacagctgcaagatgagtataaggctggcaatgcaattgtcatg
acacaggaatccaagcgtttttatccggagcagacgctggcttctcatgtgctgggttat
atgagtcgtgatggaaaagctgtcaatggacttgaggtatcatacaatgatgctctgaca
ggtaaagacggatatctgaactatcagaaggatgccaaggggatcaagcttccggggtca
caggatagctatttgccgccacagaacgggaaaaaccttaaattaacgattgatgatacg
atccagctttatatcgaggaggccatgaaagagacggttgccaagtataatccgctcagt
atgaccgtcatcgctgccgatccgaacaccatggaaattctgggcatggccaactggcca
acctttaacccgaatacgtatgcgtccacgccggatcagaaaaactttatcaaccacgcc
acacagtcgatctatgagccaggttccacattcaaaattgtgacactcgcaggggctgtg
gaagagaagctgtttgatccgaatgcaacgtttgaatccaagccaacgcgaattggtggc
tttactataagtgataacggccattcctatggacggatctcatatcttgaaggtgtgaag
cgctcaagtaatattgcctttgttaaccttggctacaacatgctggggggagaacgtctg
cgccactacattgatcagttcggttttggtaaaaagacaggcattgatctgccgagtgaa
gcagcttctcccatcaggccgctgatctataaatcggagattgctaccgcggcttatggt
catggtctcgttcaagtaacgccgattcagcaattagctgccatctcggccgttgccaac
ggcgggaagctgcttcagcctcatctggtgaaagaaattattaatccgaatgacggttca
accgaagtcatcaaaccgaaagttgttcgtcaggtgatcaccaaagagtccgccaagctc
gtcagtgggtatctggaacaggtcgtagcagaccagaccatcggtacaggccgtaacgcc
tatattgagggatatcgcgttgcaggcaaaacgggaacagcgagaaaggttattaacggt
cagtacagcaaaagcaaagatgtcgtttcatttatcggttttgcaccagtcaacaatccg
aagattgccatgctgattgttattgaccagccggatggtacaaacattggcggcggtact
gcggccgctcccgtattcaaaaaggttgtaagcaaaacgctgcaatatatgggtgttccg
aaggatacagccaaatcgactgataaaaagtcaaaagaagcggctgtcgtgcaggccaag
gctccagacttgagtggtaaaacagcgaagcaggccagaagtcagcttctgaacttgggt
atcgcttatgtaacattgggtcagggtgaaaatgtgattcggcagtatccgcaggccggt
gcttccatgaatccaggccagcgtgtatatctgctcaccgaggaaagcagcaagatgaag
gtgcctgatctgacgggtgaatccttgcgtgatgcattggaaatactttcgctcatgaag
gtgggtgttacgaccaagggtgagggatacgttgtaaagcagaaagagcaggtgtcaggc
gaacagcgtacagtgcagttgacattacagactgcgaaagctgcagtaaccggcatcccg
gatgaagcgccagattcgtccgaccctgacgcagagaagaaggatgaaactgcgaaaacg
aatgataagggtggaacgcaggagaaaggcgattccggggctaccgagagtcaaagtaac
tcccagaagcagacgactcaagacgcaacctcggattcaccagccaataaaggggcttca
cttccataa
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