Paenibacillus barcinonensis: HUB98_08500
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Entry
HUB98_08500 CDS
T06922
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pbac
Paenibacillus barcinonensis
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_08500
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUB98_08500
Archaeal homologous recombinant proteins
HUB98_08500
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Metallophos_3
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
QKS56373
LinkDB
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Position
complement(1812065..1813249)
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AA seq
394 aa
AA seq
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MRILHTGDWHLGKTLEGRSRLREQEDFVDELVKLADEQQADAILMAGDVYDSVNPPASAE
QLFYEAAARLTEHGRPLVVIAGNHDQPERVASVTPLVNRQGITLVGTPVSEAVTIHARRT
GETAHIAALPYPSEARLNELLTTDGDENVLRQAYSRRVGMLMQRLASSFRPDTVNLAMSH
IYVLGGVESDSERPIQVGGAYTVDPSSLATGAQYTALGHLHRAQAVKGEGVIRYSGSPLA
YSFSEAGQSKSITMVDLTPGGEAQVEEVLLTCGNPLVRWKARGGLAEVYRWLDEGRDSKA
YIDMEVWLEDAMSLKEIQQLRKAHEGIIHIRPVYPEMEAAGLMEQRSQLPVHELFRKFYQ
RQTGGAQPEDSLVQLFLELVDEDEPGVREEVEGR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcttgcatacaggggactggcatctggggaaaacgctggaagggcgaagcaga
cttcgtgaacaggaggacttcgttgatgaactcgttaaactggccgatgaacagcaggcg
gatgccatattgatggctggagatgtatatgattcggtgaatccgcctgcttcggcggag
cagctgttttatgaagcggcagcgcgtctgacggagcatggcagacctctggtggttatt
gctggtaaccatgatcagcctgagcgggttgcttcggtcacaccgcttgtgaatagacaa
gggattacgctggtaggcacacccgtatcggaagctgtgactattcatgctcggcgtacc
ggggagactgcgcatattgcagctttgccatatccgtcggaagcgagattgaacgagctg
ttaacaacagatggagatgaaaatgtgcttcgtcaagcctacagccgcagagttggcatg
ctaatgcagcgtttggcctcttcgtttcgtccggatacggtaaatctggctatgagccac
atttatgtgcttggcggtgtagaaagtgattcggaacgtccgattcaggttggcggtgcg
tataccgtcgatccctcctctctggctactggtgcccaatacacggcgcttggacatctt
caccgcgcacaggcggtcaaaggcgaaggggtcattcgatacagtggttctccgctggct
tacagcttctcggaagcaggacagagcaagtcgattacgatggtggatctcacaccgggt
ggcgaagcacaggtggaggaggtgctgctaacctgtggtaatccgcttgttcgctggaag
gcgcgcggaggactggcagaggtataccgctggctggatgagggacgggattccaaggct
tacattgatatggaggtctggctggaggatgcgatgtcactcaaggaaattcagcagctg
cgcaaagctcatgagggcatcattcatatccgtccagtctatcccgagatggaggcggca
gggctgatggagcagcgttcacagctgcctgtacatgagctcttccgcaagttttatcaa
cgtcagaccggaggagcacagccggaagacagtctggtacagctgttcctggagctggtg
gatgaagacgagccaggtgtgcgcgaggaggtcgaagggcgatga
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