Paenibacillus barcinonensis: HUB98_08505
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Entry
HUB98_08505 CDS
T06922
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pbac
Paenibacillus barcinonensis
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_08505 (addA)
Enzymes [BR:
pbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUB98_08505 (addA)
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HUB98_08505 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_16
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QKS56374
UniProt:
A0A2V4V6L0
LinkDB
All DBs
Position
complement(1813389..1817801)
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AA seq
1470 aa
AA seq
DB search
MMNMPKPEGSFWSDDQWSAIAEHGEDILVAAAAGSGKTAVLVERIIRKIADPSQGFSVDR
LLVATFTKAAAAEMKQRIREALERALEERPEEEHLRRQLSLLGRASITTLHSFCMEVIRR
YYQQIPLNPAFRILNENEAEMLRQELLEELFEEKYGEEEEGSTFRELVDWFSGERNDDAM
HRLVQRLYDFSRSHSWPDHWLMEMAAAFQVESVEALGQTAWVQSILRDAALALRGAAGLL
RQGIQISLQPEGPAPYAETLNADLVMVEGLLSAVEVMPWERLPEVFQPAAFGKLKPCKKD
QTDPGLQEQVKELRETAKKTVTELKASLFGRSAFTFWQELEQAAPLMQELSRLVSAFGER
YRQAKQERGQVDFNDLEHYCLHILRHEDSTPEHSMPSDAAMEYRARFDEVLLDEYQDTNT
VQEDIVRLISRERPGNRFMVGDVKQSIYRFRLAEPGLFMNKYRSYRANAPGHEDDHGESS
THEQTGMGKRIDLARNFRSRAEVVHSVNVIFRQLMNEGVAEISYDERAQLAYGASFPSET
IGGEAYTPEIMLIDRQGSGPDLTDDTEEGADVASAELESAELETAQLEARAIARRIREML
GETDKPALSVYDKALQTMRPARYGDIVILLRSTLMWAPMMIEEFRQQGIPAGGEQSKGYF
QATEVEVMLSLLQLVDNPRQDIPLASVLRSPMVGLDEEELAQIRLGHQGQSFYDAVVSAA
GPWKSEKNGHGQHAVAGQGSNVDSVIQMQWPEVWSGLEQAQRESAVTAEMEVDAGEQVEE
HAHIREQAEAVFHVEEEGYAALQRKLIRFMRQLEQWRLEARQGSLSELIWRIYRDTGYLD
WVGGLPGGQQRQNNLKALYDRARQYEEATANRGLFRFLTYVSRLRENGGDLGTAASGSGE
QDNVVRIMTIHRSKGLEFPIVFVGGISKMFNQQDLHAPFLMHKELGFGPRFVDRGNRVAY
PTLANLAIRRRAQFELLAEEMRVLYVALTRPKEKMILVGTVKDAAKKAQAWSQVKDSSEL
ALPDYLLAAGRSYLDWIGPALIRHPDAAVLRELAGDRDTYSACLASDESRWSIWITTADQ
VSRNLNTDHVQSEDSEDGLNELRRERKAALEKMQPVTLVDIVPNTDINRPIDADNSYDVA
PDEKQAHEQGLYAAAPQDLLREVDRRLSWTYPYESASQVAASTSVTEIKSLLSVQEYALY
DVIEEIQEQSINEEIQEQLINEEIQGQLVEEIQNQQVEAILEQQDTVGAVTQHMPETNHS
FKLHLRRPKFMGERQLTGTERGTVYHTLMQHLPVDGNVVDTEVVEKTIARLVNLQILLPY
QAHAIDRSELTSFFDTQPGKELLHAAWVRREIPFTYGLPAHQSPQEWIHALHQNEEQELF
GKSNDVKAVLENETVLVRGIIDCLYEVNGELVLLDYKTDRVLEHRGGLEPLVENYRFQLQ
LYAQAIKDILGRQVDHIWLYFFDGGHAVKL
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatatgcccaaaccggaaggcagcttctggagcgatgatcaatggagtgccatt
gcggagcatggggaggatattctggtcgctgcggctgcaggatcgggtaaaacggctgtt
ctggttgaacggattattcgcaaaatcgcggacccttcccaagggttcagtgtggatcgt
ttgctcgtagctacgtttacgaaggcggcggcggccgagatgaagcagcgtattcgggag
gcgctggagcgcgcacttgaagagcggcccgaggaggagcatctgcggaggcagctatca
ctgctcgggcgagcctccataacaacgctgcattccttctgtatggaggtcattcgcagg
tactatcagcagattccgctgaatccggcttttcgtattctgaatgaaaatgaggctgaa
atgcttcgccaggaactactggaggagctgtttgaggagaagtacggcgaagaggaggag
ggcagcacattccgcgaactggtggactggttcagcggagagcgaaacgacgatgcgatg
catcggctggtgcagcgtttgtatgatttctcgcgaagccattcatggccggatcactgg
ttgatggagatggcagcggcttttcaggtagaaagcgtggaagcgctggggcaaacggca
tgggtacagagcattttacgtgacgcggctcttgcgttaaggggtgccgcaggtttgctg
cgacaagggattcagatttcactgcagcctgagggaccagcaccttatgcagagacactc
aacgcggatctggtcatggttgaagggcttctatccgctgtggaagtgatgccttgggaa
aggttgccggaggtgttccagcctgctgcatttggcaagttgaagccttgtaaaaaggat
cagacagaccctggtctgcaggagcaggtaaaggagctgcgggagacagccaagaagaca
gttaccgagctgaaagcttctctatttggcaggagtgccttcaccttctggcaggagctt
gagcaggccgcaccgcttatgcaggagctctcccggctggtcagtgcatttggcgagcgt
tatcgtcaggcgaagcaggaacgtggacaggttgattttaatgatctggagcactattgc
ttgcacattttgcggcatgaggattccacgcctgagcattcgatgccttccgatgcggcg
atggagtatcgtgcacgctttgacgaagtgctgctggatgagtatcaggataccaataca
gttcaggaggatatcgtcagactgatctccagagagcgtccgggcaaccgatttatggtt
ggtgatgtaaagcagagcatttatcgttttcgcttggccgaaccgggccttttcatgaat
aagtaccgcagttacagagcgaatgcccctggacatgaggatgatcatggagagagcagt
acgcatgagcagacaggaatgggaaaacgcattgatcttgcccgaaatttccgcagccgt
gctgaggttgtacattccgtcaacgtcatattcagacagcttatgaatgaaggagttgcg
gagattagctatgatgaacgggcacagctggcttacggtgcgtcatttccttcagagacg
attggaggggaagcctatactcctgagatcatgctgattgatcgtcaaggaagcggccca
gatctgacggacgatacggaggaaggggcagatgtagcttcggcagaattggaaagtgcc
gagctcgaaacagcccaactggaagcgcgggccatagcccgtcgtatacgtgagatgctt
ggagaaacagacaagcctgctctcagtgtatatgacaaggctctgcaaacgatgcgccct
gcgcgttatggagatattgttattttgctgcgctcgaccctgatgtgggccccgatgatg
attgaggagtttagacagcaaggcatccccgctgggggggagcagagtaaagggtacttt
caagctacggaagtagaggtcatgttatccctgctgcagcttgtagataatccaagacag
gatatccctttagcctccgtgcttcgctctccgatggttgggctggatgaggaggagctt
gcgcagatccgtctgggtcatcaaggacagtcgttctatgatgccgttgtatcagcagct
ggaccatggaagtctgaaaagaacgggcatggtcagcatgctgtagcgggtcaaggctcg
aatgtagacagtgtgatccagatgcagtggccggaagtgtggtcagggctggaacaggca
cagagggaatcagctgttaccgctgaaatggaagtcgacgcaggagaacaggtagaagag
catgctcatattcgcgaacaggccgaggcggttttccatgtggaggaagagggttacgcg
gcgctacagcggaagctcattcggttcatgcgtcagctggagcagtggagactggaggca
agacagggaagtttaagtgagctgatctggcgtatttatcgggacacaggctatctggac
tgggttggtggacttccgggcggtcagcagcgtcaaaataatctgaaggctctgtatgat
cgggcacgtcaatatgaagaggccacggctaatcgcgggctgttccggttcctcacgtat
gtctccagattacgtgagaatggtggagatctcggcactgcggcgagtggctcaggtgag
caggataatgtcgtacgaataatgacgattcatcgaagcaaaggcttggagtttccgatt
gtttttgttggtggcatctccaaaatgtttaatcagcaggacttgcatgcaccatttctc
atgcacaaggagcttggtttcggtccgagatttgtggatcgtggcaaccgggtcgcgtat
ccgactctagccaatctggcgatcagacggcgggctcaattcgagctgcttgcagaagag
atgcgtgtattatacgtggcgttaacccggccaaaagaaaagatgattctggtgggtacg
gtaaaggatgcggctaaaaaggcacaggcctggtctcaggttaaagatagctctgaactg
gccttgccggattatttgcttgctgccggacgcagctatctggactggatcggaccagcc
ttgatcaggcaccctgacgctgctgtgctgcgtgagcttgcaggtgaccgcgacacttat
tcagcttgccttgcgagtgatgaatcacgctggagcatctggattactactgcagatcag
gtgtcacgtaatttaaatacagatcatgtacagagcgaagacagtgaagatggactaaac
gaattgcggagagagcgcaaggcagctctggaaaagatgcagccagtcacacttgtagat
atagtcccaaacacggatattaataggcccattgatgctgacaattcgtatgatgtggct
ccagatgagaagcaggcgcatgagcagggcctgtatgcggctgctccgcaagacctgctg
cgtgaggttgatcggcggctttcctggacttatccgtatgaatcggcttcccaagtagcg
gcaagcacttcggtaacggagatcaagagcctgctctctgttcaggagtatgctttgtat
gacgtaatagaagagattcaggagcagtcgattaatgaagagattcaggagcagttgatt
aatgaagagattcaggggcagttggtagaggaaatacagaatcaacaggttgaagcaata
ctggaacagcaggatacagtcggtgcagttacgcagcatatgccggagacgaaccattca
ttcaagttacatttacgtcgtcccaaattcatgggggagagacagctgacgggtactgaa
cgtggaaccgtctaccatacgctgatgcagcatcttcctgtagatgggaacgttgttgat
acagaggttgttgaaaaaaccattgcacgactggtcaaccttcagattttgctgccttac
caagcgcatgcgatagaccgaagcgagctgacgtccttttttgatacacagccagggaaa
gaactgctccatgcagcatgggtcagaagagagattccatttacgtatggccttccggca
catcaatctccgcaggagtggattcatgcactgcatcagaatgaggagcaggagctcttt
ggtaaaagcaatgacgtcaaggcagtgcttgagaacgaaacggtgctcgtaagaggtatt
atagattgtctctatgaagtgaatggcgagcttgtgctgctggattataaaactgaccgg
gtgctggagcatcgtggcggactggagccgctggttgaaaattatcgctttcagctgcag
ctgtacgcacaggcaattaaggatatattgggccgccaggttgaccatatatggctctat
tttttcgatggtggtcatgcggtcaaattgtaa
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integrated database retrieval system
