Paenibacillus barcinonensis: HUB98_10670
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Entry
HUB98_10670 CDS
T06922
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03410
Base excision repair
pbac03430
Mismatch repair
pbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUB98_10670 (recJ)
03430 Mismatch repair
HUB98_10670 (recJ)
03440 Homologous recombination
HUB98_10670 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_10670 (recJ)
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HUB98_10670 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HUB98_10670 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HUB98_10670 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QKS56752
UniProt:
A0A2V4VS01
LinkDB
All DBs
Position
complement(2301815..2304223)
Genome browser
AA seq
802 aa
AA seq
DB search
MLYSQYRWNTPHINLEAAAVLSQALSVSPLVGRLLVSRGVHNEQEAERFLHPDMNQMHDP
YLLLGMREAIPRIKLALEREEHILIYGDYDADGVSSTSLMIHLMRHLGASYDIYIPHRSN
EGYGLHNHALDWAHQQGVTLIITVDTGISAVEQIAYASTLGIEVIVTDHHEPPEILPEAY
ALINPKLPDCPYPFKGLAGAGVALKVAQALIGEVPGEWMEIAAIGTVADLMPLEGENRVI
VSYGIESMRGSKLPGVSALLEISGVDQTQVTSVNIAFAMAPRINASGRLDHAGRAVSLLT
TESLDEAHTLAGQLDLLNRERQQVVEGILQEATMQLELKIESRSGSVPDVIVLAGEGWNV
GVVGIVASKLLERYYRPTLILGIDPESGVCKGSARSIEGLDIYEALTANKQYMDHYGGHP
AAAGMTLHRDQLQQLETGLNEYAATVLTEADFIPQRLADDECRISDVPIKVIQEIDRLQP
FGMSNPSPRFVFRKVTVKETRTMGRDKRHLKLVLEQEGQQLETVAFGKGALAEFLTPGSV
IDVMGELSINEWNGMRKPQLMLQDIHVPGAQVFDMRGHADPLHAMKHFLSALDVHLRYKA
GSIGAIVRKETNVSEGNSLYEPCLWVYDRKVGLFPCNAAAQQYGQEEVRTLFVFDTPETP
EQLDAMLALFSGAENIILLHGSGNRLDRLQMPSRELFKRIYMLVFKWKAEPVVEQEMIPV
LSRQCGCSPRMITMMLDVFEELSFITREDGMITVADNPPKRDLTSARHYQALEHMAETEQ
VMLDASTPQLTQWMISRMKGVS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgctttattcgcaatatcggtggaatacaccacatattaatctggaggcggctgcggta
ctttcgcaggcgctttccgtttcaccacttgtaggacgtttgcttgtcagccgaggtgtg
cacaatgaacaagaggcagaacgttttctgcatccggatatgaatcagatgcatgatccc
tatctgctattggggatgcgagaggctattccccgaatcaagctggccttagagcgagaa
gaacatattttaatatacggggattatgacgctgacggagtatccagtacatcgctgatg
atccatctcatgcgtcatttgggggcttcatacgacatctatatccctcatcgttccaac
gaagggtatggactccataaccatgctttggattgggctcatcagcaaggagtaactttg
attattaccgttgatactggcatcagcgctgttgaacagattgcctatgcttctacactg
ggtatcgaggtgattgtaacggatcaccatgaaccccctgaaatactaccagaggcctac
gcattaattaatcccaagctgccggattgtccctaccctttcaaaggcttggcaggagca
ggggtggccctgaaggttgcacaggcgctcatcggtgaagtgcctggtgaatggatggag
attgcggcaatcggcacagtagccgatttgatgccgctggaaggcgagaatcgggtgatt
gtcagttacgggatagaatccatgcgcggctcgaagctgccaggagttagtgctttactg
gagatcagtggtgtggaccaaacccaggtgacttccgtaaatattgcctttgccatggcc
ccgcgtatcaatgccagtggccgtctggatcatgccggaagagccgtatccttgcttacg
acagaaagtctggacgaggcgcacacactcgcaggacagcttgatctgttgaatcgggag
cgacagcaagtcgtagagggcatactacaggaagcgacgatgcagctggagttgaaaatc
gagtcgcgttcaggatcagtcccggatgtcatcgtactggctggcgagggctggaatgtt
ggcgtggttggcatcgtagcttccaaattactcgagcgatattatcgaccaacgttgatt
ctcggcattgatcccgagagtggggtttgcaaaggctccgctcgttcaatcgaaggcttg
gatatctatgaggcgctgacagcgaacaagcagtatatggaccactatggcggacaccct
gcggctgcggggatgacacttcatcgggatcaattgcagcagctagagacaggtttgaat
gaatatgccgcaactgtcctaacagaagcggattttatacctcagcggctggctgatgat
gaatgcagaatcagtgacgtgcctatcaaggtgattcaggagatcgaccgtttgcagccg
tttggcatgagcaatccatccccgcgttttgtatttcgaaaggtgactgtcaaagaaacc
cggaccatggggcgagataaacgccatctgaaactggtgctggagcaggaaggtcagcaa
ctggaaaccgttgcttttggcaagggagcgttggctgaattcctcactccaggttctgtc
attgatgtgatgggcgaactgtccattaatgaatggaatggtatgagaaagccgcagctg
atgcttcaggacatccatgttcctggggcgcaggtatttgatatgcggggacatgctgat
ccgttacatgccatgaaacacttcctgagcgcactggatgtacacttgcgttataaggca
ggttccatcggagcgattgtgcgtaaggagacaaatgtttctgagggaaattcattgtat
gaaccgtgcctttgggtatatgatagaaaggtcgggctatttccgtgtaatgctgctgct
cagcagtatggacaggaagaagtgcgaacgttatttgtgtttgatacgccggaaactccg
gaacaacttgatgcaatgctggctctattcagcggagctgagaatatcatccttctgcac
ggatcaggcaaccgcctggatcgccttcagatgccttccagagaactgttcaagcgtatt
tatatgctggtgtttaaatggaaagcggaacccgtggtggaacaagaaatgattcctgtg
ctcagccgtcagtgtggctgttctccacgtatgattacgatgatgctggatgtttttgaa
gagctgtccttcattacccgagaggatggtatgattacggtcgctgacaatccaccgaaa
cgtgatctgacatcggcacgtcactatcaggcgctggagcatatggccgagacggaacag
gtgatgctggatgcatcgacacctcagctgacacaatggatgatatcccggatgaagggc
gtatcttag
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integrated database retrieval system
