Paenibacillus barcinonensis: HUB98_10730
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Entry
HUB98_10730 CDS
T06922
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUB98_10730 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_10730 (ruvB)
Enzymes [BR:
pbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUB98_10730 (ruvB)
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUB98_10730 (ruvB)
RecFOR pathway proteins
HUB98_10730 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
AAA_14
AAA_22
nSTAND3
NB-ARC
AAA_18
AAA_2
NTPase_1
Rad17
AAA_3
RNA_helicase
TsaE
Resolvase
AAA_24
DUF815
Bac_DnaA
AAA_33
Sigma54_activ_2
AAA_17
AAA_28
AAA_25
ABC_tran
NPHP3_N
NACHT
bpMoxR
IstB_IS21
ATPase_2
RsgA_GTPase
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QKS56762
LinkDB
All DBs
Position
complement(2315902..2316912)
Genome browser
AA seq
336 aa
AA seq
DB search
MDERIISANLMMEDQNVELSLRPRYLNEYIGQNQVKENLKIYIEAAKLRNEALDHVLLYG
PPGLGKTTLANIIANELGVNLRTTSGPAIERPGDLAALLTNLQEGDVLFIDEIHRLHRTV
EEVMYPAMEDSALDIMIGKGPSARSVRLDLPPFTLIGATTRAGLLSAPLRDRFGVISRLE
FYTVDELAYIVSRSTEILGVEIVGDAAEEIALRSRGTPRIANRLLKRVRDFAQVRGDGII
TQAVAEEALQRLQIDPRGLDEIDHKMLKSMIHSFRGGPVGLDTIAATIGEESQTIEDVYE
PYLLQIGMIQRTPRGRIVTDLAYHHLGLPVPPRDAK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacggattatatccgcaaacctgatgatggaggaccagaacgttgaattaagt
cttcgtccccgttatttgaatgaatacatcgggcagaatcaggtgaaggaaaatcttaaa
atatatattgaagcggctaaattacgaaatgaagcattagatcatgtgctgttatacggt
cctccgggacttggtaaaacaacacttgctaatattattgccaatgaacttggcgtaaat
ctcagaacaacttcaggtccggcaattgaacgcccaggcgatctcgctgcgctgctgacg
aatctgcaagagggagatgtcttgtttattgacgagattcatcgcctgcatcgtacggtt
gaagaggtgatgtatcccgcaatggaagattccgcattagatattatgattggcaagggt
cccagtgcacgatccgttcgtttggatttgccgccatttacgttgattggtgcgactacc
cgtgcggggctattgtctgctcctcttcgagatcggtttggggttattagccgtctggaa
ttctacacagttgatgaactggcctacatcgtatcacgctctaccgaaattttgggtgta
gagattgtgggcgatgccgcagaggagattgctctgcgttcacgcgggacaccacgtatt
gctaatcgtttattgaaacgggtacgtgattttgcgcaggtgcggggcgatggcattatt
acacaagcggtggcagaagaagcattgcaacgtcttcagattgatccgcgtggattagac
gaaattgatcacaagatgctcaagtccatgattcatagcttccggggaggccctgttggt
ctggataccattgcggcaaccattggggaggagtctcagacgattgaggatgtatatgaa
ccgtatctgttgcagatcggtatgattcagcggacgccaagaggacgaatcgtaacggat
ctggcctaccatcatcttgggctgcctgttccgcctagagatgccaagtaa
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