Paenibacillus barcinonensis: HUB98_12360
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Entry
HUB98_12360 CDS
T06922
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
pbac
Paenibacillus barcinonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
GGDEF_2
sCache_3_2
PXA
dCache_1
Motif
Other DBs
NCBI-ProteinID:
QKS57044
LinkDB
All DBs
Position
2673265..2675652
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AA seq
795 aa
AA seq
DB search
MTIFGLLLSTVPILLTGIAAFMYSSSQTELHRTEANEQLLEQIQSNVEHKLATVSYMLDQ
AVRSPITLRSLADPALQQRRSQLQAPELQTEFQHMRSWEPMLDIMLVNQSQDWLIDATGL
YANTRFPLSLPMKDLITDTLTSGWQLAPSSIFSHENSNETATSGTSCMYHIALARTVPDV
VHSSNAALVAGIPACYMQNPLGQSVASDSSASGLIIINRDQRIIAHPDAAYIGQPLSAIG
LQDRHNGEAVQDLSPVTYSDAFAEREVRFANADYSLTYTPSTLKGWTYILISPENTLTKD
YIKIGFHTLYISMAMLLLSLLLAWLGSRQMLVPIQRILTQLGDHMIVKGNGHAVPLNQNV
VSPPDELEQIRLGVTRLSDARSQLESTLNQHQGQIRTYYMLQLFQGRTSLNTMHETLCEQ
GYAVQLSSWQNIAVIALQPELLHHKRYTLEDRSLLLFALQNILEESITPDQQLLPIVVEQ
NVVTVVGTNEEDRITFSKQLLRLAEQLQQQMNEVLDLKVSIGLSQPQLFMNHIPQAYNEA
MDALKHRMRLGTGIIVQYGQADLTSAAWAMTYPEALEYSLLQTIQQADEDAAAKQLTEMM
QTLFSLECTPEEYQAALMRLLVRVLQVAQESGIRLTQISEGTRSLFQELHDLQYAAEIER
WFSREVILPVIDIFKQKQYAQYQSISEKMIAIIQQDYGKDLTLEECAERLHYNANYLSSV
FRKETGASFSEYLTRYRLNIAKRWLDESEWTVKEIAERLRYTNPQNFIRSFRKWEGMTPG
RYRERKQHPERAVKG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgacaatattcggcctgctgttaagtaccgtacccatccttttgacgggaattgccgct
tttatgtactcttccagccagactgagctgcatcgtacagaagccaacgaacagctgctt
gaacaaatacaatccaatgtagaacacaagctggctaccgtcagctacatgctggatcag
gctgtccgttctccaattacattacgctcccttgctgaccctgctttgcaacaacgaaga
agccagctacaggcccccgagcttcaaacggagtttcagcatatgagatcctgggagcca
atgctcgacattatgctggttaatcagtcccaggactggctgattgatgctaccggcttg
tatgcgaacactcgctttccgttatctctgccgatgaaggatctcattacagatacctta
acctcaggatggcagctggcaccctcatctattttcagtcatgaaaacagtaatgagact
gcaacctctgggacaagctgtatgtatcatattgctcttgccagaacagttcctgatgtc
gttcattcatccaatgcagccctggtggccggaattccagcatgttatatgcaaaatcca
ctgggacagtctgtcgcgagcgactcttctgcctccggtctcattattattaatagggat
caacggatcattgctcacccggatgccgcatatattggacagcccttatccgccataggg
cttcaggatcgtcataacggcgaagctgttcaagacctgtcacctgtcacctattcggat
gcttttgcggaacgtgaagtacgttttgccaatgcagattattcgttaacatatactccc
tctacgttaaagggatggacatatatccttatctcacccgagaacacgttaaccaaggat
tatatcaaaatcggttttcacacgctctatatcagtatggctatgcttttactctcgctg
ttgctcgcctggctggggtcaagacaaatgctcgttccaatccagcgtatccttactcaa
ttaggggaccatatgattgttaaggggaacggacatgccgtgccgctgaatcaaaatgta
gtgagtccgcctgatgagctggagcagattcgactgggggtcacccgtttatccgatgca
cgttcccagcttgaatccacattaaatcagcatcagggtcagattcgcacatattatatg
cttcaattgtttcaaggccggaccagccttaatacaatgcatgagacactatgcgaacag
ggatatgctgtgcagctttcatcatggcaaaatattgccgttattgcactgcaacccgag
ctattacatcataaaagatatacgttggaggatcgttccttgcttttatttgctcttcag
aacattcttgaggaaagtattacacctgatcaacaactgctccccattgtggttgagcag
aatgttgtaacagtcgtgggcacaaacgaggaagataggataacattctcaaagcagctt
ttgcggcttgcagaacaattgcagcagcagatgaatgaggtgctggacttgaaggtgagt
atcggcttgagccagccacagcttttcatgaatcatatcccgcaagcctacaatgaagca
atggatgccttgaaacatcgcatgcggcttgggactggtattattgtccaatatggacaa
gctgatctgacttcggcagcatgggccatgacttaccctgaggcgctggagtattcactg
cttcagactattcaacaagcagacgaggacgcagcagctaagcaattgaccgaaatgatg
cagacgctattttcgctcgaatgcacgccggaagagtatcaggctgctttaatgaggttg
ttggtacgagttcttcaggtcgctcaagaatcgggaataaggctcacacagatcagtgaa
ggcactcgttccctttttcaggagctgcatgatttacagtacgccgcagagattgagcga
tggttctcccgagaggtaatcctgcctgttattgatattttcaaacaaaaacaatatgca
cagtatcagagcatttcagaaaagatgattgccattatccagcaagattatgggaaagat
ttaacactcgaagaatgtgctgaacggctccattacaatgccaattatctaagcagtgtt
ttccgtaaagaaaccggggcctcattcagtgagtacctgaccaggtatcggctgaatatt
gccaaaagatggctggatgaaagtgaatggacggtgaaagaaatcgcagagcggctccga
tacacaaatccacaaaatttcatccgctcctttcgcaaatgggaggggatgacacccgga
agataccgcgagcgcaagcagcatcctgaacgggccgtcaaaggttag
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