Paenibacillus barcinonensis: HUB98_13535
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Entry
HUB98_13535 CDS
T06922
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HUB98_13535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbac03021
]
HUB98_13535
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_13535
Enzymes [BR:
pbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HUB98_13535
Transcription machinery [BR:
pbac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HUB98_13535
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HUB98_13535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
Motif
Other DBs
NCBI-ProteinID:
QKS57223
LinkDB
All DBs
Position
complement(2938901..2939845)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVDVNDDGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVSSVQIDG
VLHEFATVPGVMEDVTEIILNLKALSLKIHSDEEKVLEIDAEGEGAITAGDIRADSDVEI
LNPDLHIATLGPGSRLHMRIFANRGRGYVQADRNKRDDQPIGVIPVDSIFTPISRVNYAV
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTEHLMLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaaaattgagacggtagacgtcaacgatgatggcacctat
gggaaattcgtagtagaaccgctagagcgcggatacggtacgacgcttggaaactcgctt
cgccgaatcctgctctcgtcactgccgggtgcggcagtgtcttcggttcaaatcgatggc
gttctgcatgaatttgctacagttcctggcgtaatggaagacgtaacagagattatcctt
aacctgaaagctttatcgctcaaaattcactctgatgaggagaaagtgctcgagattgat
gctgaaggcgaaggagcaatcacggctggagatattcgtgctgattccgatgttgaaatc
cttaacccggatcttcacattgctacgcttggaccaggttcgagacttcacatgcgtatt
tttgccaatcgcggtcgcggctacgtccaggcagatcggaataaacgcgatgaccagccg
atcggcgtcatccctgtcgattccatcttcaccccgatcagccgtgtaaactacgctgtg
gaaaatacgcgtgtaggccaagtaaccaactatgacaagctcacgttggaagtttggact
gacggaagtattcgtcctgaagaggctgtaagccttggcgctaaaattttgaccgagcat
ctgatgctcttcgtgggtcttacagacgaagcgaaggatgcagagatcatggttgaaaaa
gaagaagacaaaaaagaaaaagtactcgaaatgacgatcgaagagctggatctctctgtt
cgttcctacaactgcctcaaacgtgctggtattaataccgtacaagagctgaccacgaaa
acggaagaagacatgatgaaagtccgtaacctcggacgcaagtctttggaagaagttcaa
gagaagcttgaggaactgggattgggacttcgtacagaagaatag
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