Paenibacillus barcinonensis: HUB98_13885
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Entry
HUB98_13885 CDS
T06922
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03420
Nucleotide excision repair
pbac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUB98_13885 (pcrA)
03430 Mismatch repair
HUB98_13885 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_13885 (pcrA)
Enzymes [BR:
pbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUB98_13885 (pcrA)
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUB98_13885 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HUB98_13885 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
GBS_Bsp-like
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKS57286
UniProt:
A0A2V4VBA0
LinkDB
All DBs
Position
complement(3000858..3003230)
Genome browser
AA seq
790 aa
AA seq
DB search
MQPVNIHDAIARLNTPQRQAVEATDGPLLIMAGAGSGKTRVLTHRIAYLIATRKAPPWGI
LAITFTNKAAREMQDRVSQLVGGSQGRDIWVSTFHSMCVRILRRDIERIGFTSNFSILDS
SDQLSVIRSCMKDQNIDTKKFEPKAVQAMMSTAKNELISPEQYEKQAGDYFEGIVAKVYT
MYQKRLRANNSLDFDDLIMATIQLFKEVPEVLDFYQKKFQYIHVDEYQDTNRAQYMLCRM
LADSHHRICVVGDSDQSIYRWRGADITNILNFEKDYPEAQTILLEQNYRSTSNILNAANE
VIGLNTGRKPKKLWTDKEGGSKIKVYRADSEHDEGYFVTSEISKNVKNGKSYQQHAILYR
TNAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDILAYLRLLSNPDDDISLTRIINVPK
RSIGDTTVAKLAAAAGERGISIFRVLQVVDDLGFAGRTRNALVEFYDMIAALHQMVEYLS
VTELTEKILEMSQYRDEMQKENTIESRARLENIEEFLSVTMEFEKNNEDKTLVSFLTDLA
LIADIDSMNDDEEDQSDAVTLMTMHSAKGLEFPVVFIIGMEEGVFPHSRAFMDNEELEEE
RRLAYVGITRAEEQLFLSCAQMRTLFGRTTANPPSRFLDEIPDELKEDTSIARDRYRRGT
STGGGSYGGRGLGASGGSNFGSRATSATELFEQQSRSGSSAMASAGPTSRVTTSISRPGS
AAPTSASKSVSSDSAAGFKAGDKVQHGKWGTGTIVAVKGSGNDTELQIAFPAPVGVKRLL
AGFAPITKVE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgtaaatatacatgatgccatcgcacggctgaacacccctcagcgccaagct
gtggaggcaaccgatggaccattgctgattatggctggtgctggctcgggtaaaacccgg
gtgctgacgcaccgcatcgcctatctgatcgcaacacgaaaagcacccccgtggggcatt
ttggcgatcacgtttaccaataaagcagctcgggagatgcaggaccgggtatcccagctt
gtcggcggttctcagggccgtgacatctgggtatccactttccactccatgtgtgtgcgt
attctgcgccgagacattgaacgcatcggcttcacatccaacttcagcattctggactca
tcggaccagttatccgttattcgcagctgtatgaaggatcagaatattgatacgaagaag
tttgaaccgaaagctgtacaggcgatgatgagcacagcgaaaaatgaactgatcagcccg
gagcaatatgagaagcaggctggagactatttcgaaggcattgtagcgaaggtatatacg
atgtatcagaagcgtttaagagccaacaactcgctcgattttgacgacctgatcatggcg
acgattcagctgttcaaggaagtgccggaagtgcttgatttttatcagaaaaaattccag
tacattcatgtcgacgagtatcaggatacgaaccgtgcacagtacatgctgtgccgtatg
cttgctgacagccatcaccgcatctgcgtcgtgggggatagtgaccagtcgatctatcgc
tggcgtggagcggacattaccaacatccttaactttgaaaaagactacccggaagcgcag
acgattctgcttgagcagaattatcgctccacctccaacattctgaatgcggcaaatgaa
gtaatcggtctgaatacaggccgcaagccgaagaagctttggacggacaaagaaggtggc
tcgaagatcaaggtataccgggcggattcggagcatgacgaagggtattttgtaacctcg
gagattagtaaaaatgtgaaaaacggcaaatcctatcagcaacacgcgattttgtatcgt
accaatgcacagtcccgggtcatcgaggaaattctcatcaagtctgacattccttatcag
attgtcggcggtatcaagttctatgatcgaaaagagatcaaggacattctggcttatttg
cgtttgttgtccaacccggatgatgatatcagcttgacccgaattattaatgtgcctaag
cgtagcatcggggatactacagtagcgaagctggcagcggcggcgggagagcgtgggatt
tccattttccgtgtattgcaggtggtagacgatcttggttttgcgggtcgcacacgtaat
gcgttggtagaattctatgatatgatcgctgcgcttcaccagatggtcgaatacctttcg
gtgacggagctgacggagaaaattttggagatgagccagtatcgtgacgagatgcagaag
gaaaacacgattgaatctcgtgcaaggctggagaatattgaagagttcctgtcggtaacg
atggaatttgagaaaaataatgaagacaaaacgctcgtttcgttcctcaccgatctggca
ctcattgcagacatcgacagcatgaacgatgatgaagaggatcagagcgatgcggtcaca
ttgatgaccatgcacagtgcgaaaggtctggagttcccggttgtcttcatcattggtatg
gaggaaggggttttcccgcacagccgggcctttatggataacgaagagctggaggaagag
cgtcgtctggcttatgtcggtataacacgcgcagaagagcagctattcctgtcctgcgcg
cagatgcggaccttgtttggacgcactacagcgaacccaccttctcgtttcctcgatgaa
attccggatgaactgaaggaagatacgtctatcgcacgtgatcgttatcgtcgtggcacc
agcacaggtggtggatcgtatggtggacgtggcttgggcgctagtggcggaagcaacttc
ggcagcagggcaaccagtgctaccgagctgtttgaacagcaaagtcgcagcggctcatcc
gcaatggcatccgctggaccgacatcacgtgtaacaacaagcatctctcgtccgggctct
gcagcacctacgtcagcttcgaagtctgtctcgtccgacagtgcggcaggcttcaaggca
ggagacaaagtgcagcacggcaaatggggaacgggtaccatcgtagcggtcaaaggcagc
ggtaacgataccgagctgcagattgctttcccggctccggtgggcgtgaagcgcctgctt
gccggatttgccccgattactaaagtggaataa
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