Paenibacillus barcinonensis: HUB98_14425
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Entry
HUB98_14425 CDS
T06922
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac00260
Glycine, serine and threonine metabolism
pbac00460
Cyanoamino acid metabolism
pbac00630
Glyoxylate and dicarboxylate metabolism
pbac00670
One carbon pool by folate
pbac00680
Methane metabolism
pbac01100
Metabolic pathways
pbac01110
Biosynthesis of secondary metabolites
pbac01120
Microbial metabolism in diverse environments
pbac01200
Carbon metabolism
pbac01230
Biosynthesis of amino acids
pbac01240
Biosynthesis of cofactors
pbac04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HUB98_14425
09102 Energy metabolism
00680 Methane metabolism
HUB98_14425
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HUB98_14425
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HUB98_14425
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HUB98_14425
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HUB98_14425
Enzymes [BR:
pbac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HUB98_14425
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QKS57386
UniProt:
A0A2V4VM79
LinkDB
All DBs
Position
complement(3141629..3142876)
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AA seq
415 aa
AA seq
DB search
MEQLRKNDPAVLEAMNLELKRQQNNIELIASENIVSEAVIEAMGSVLTNKYAEGYPGKRY
YGGCEHVDVVEDIARDRAKELFGAEHANVQPHSGAQANMAVYLAALKPGDTVLGMNLAHG
GHLTHGSPVNASGLLYNFVAYGVQEDTFLIDYDEVRKAAFKHRPRLIVAGASAYPRTIDF
EKLASIANDVGALFMVDMAHIAGLVAAGLHPNPVPHAHFVTTTTHKTLRGPRGGMILCRK
SWAAAIDKAVFPGSQGGPLMHVIASKAVAFGEALQPSFKTYAQNVVKNAQVLAETLIAEG
LNIVSGGTDNHLMLIDTRSVNITGKEAEHVLDSIGITVNKNAIPFDPTSPFITSGIRIGT
PAATSRGMDEKAMVSIGKIIAKTLKNPKDTATLDQARAEVTALTDQYPLYTDLKY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattgcgcaagaatgaccctgcagtattggaagcgatgaatcttgaattgaag
cgtcaacagaacaacatcgagctgattgcatccgagaacatcgtaagtgaagcggtaatt
gaagcaatgggctccgttctgacaaacaaatatgctgaaggatatccgggcaaacgctac
tatggcggctgcgagcatgtggatgttgttgaagatatcgcgcgtgatcgtgcgaaagag
ctgtttggtgcagagcatgcgaacgtgcagccacactccggtgcacaagcaaacatggct
gtatatttggcggcattgaagcctggcgatactgtactgggtatgaacctggcacatggc
ggccacttgacgcatggtagtccggttaatgcttccggtttgctgtacaacttcgttgct
tacggcgtacaggaagatacattcctcattgattatgatgaagttcgcaaagcagccttc
aagcaccgccctcgtctgatcgtagcgggtgcaagtgcatatccacgtaccattgatttt
gaaaagctggcttccatcgccaatgatgttggcgcactgttcatggtagatatggcgcat
atcgcaggactggttgcagctggattgcatcctaacccggtgccgcatgcacactttgta
acaacaacaacacacaaaacgctgcgcggaccacgtggcggtatgattttgtgccgcaaa
tcctgggcagccgcgattgacaaagcggtattccctggttcccaaggtggaccgttgatg
cacgtgatcgcttcgaaagccgtagcattcggagaagcgctgcagccttccttcaaaacc
tatgcacagaacgttgtgaaaaacgcacaagtgctggctgaaacattgatcgctgaagga
ttgaacatcgtatccggcggtacagataaccacttgatgctgattgatacacgcagcgtg
aacatcactggtaaggaagctgagcatgtgcttgattccatcggcattaccgtgaacaaa
aatgcgattccgtttgacccgacaagtccgttcatcaccagcggtatccgtatcggtaca
cctgcggcaacatcccgcggtatggatgagaaggcgatggtatccatcggtaaaatcatt
gccaaaacgctcaaaaatccaaaagacacagcaacgcttgatcaggcacgcgcagaagta
accgctctgactgaccaatacccgctgtacactgaccttaaatactag
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