Paenibacillus barcinonensis: HUB98_15725
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Entry
HUB98_15725 CDS
T06922
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac00040
Pentose and glucuronate interconversions
pbac01100
Metabolic pathways
pbac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HUB98_15725
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUB98_15725
Enzymes [BR:
pbac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HUB98_15725
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QKS57609
LinkDB
All DBs
Position
complement(3446039..3447466)
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AA seq
475 aa
AA seq
DB search
MRKTVRSLCSTALALTLGLTLLSGPASVQAAGNADYNLTGFSQGNTGGGMISESSTAVYK
KVYNATDLALALKKNSGVKVVEIMNDLDLGWNEIPSTAQASPFAKHNDALTHPVLKQTGV
SKITVDGFNGLTIFSANGSKIKHASITVKRSSNVIIRNLEFDELWEWDESTKGDYDKNDW
DYITLEDSSGIWIDHCTFNKAYDGLVDSKKGTSGVTISWSTFKGDDGSSNSWVTRQINEL
EANKASYPMYNHLRSSAVGLSKEDIIAIAGSQKKGHLVGATSLESTNANLSITLHHNVYK
DIQDRMPRLRGGNAHAYNIIMDATDARAAQARISNAMAAAIASKGYKFGITSNGAISTEN
GAVLVEKSVIKDVQYPVRNNQTDPTNATYTGKISVADTIYSLDGSSFRGSSDTAGSPLAP
VPAAIKPFSWNGFSSLPYSYQADDPSTLNARLTASNGAGAGKVNWSKDNWLKTSY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaacagtacgaagcttatgcagcacggctctggcccttacgctggggctcacc
ttattatcgggacctgcaagtgtgcaggcagcgggcaatgcggattataatctgacaggc
ttctcccaaggcaatacgggtggaggtatgatcagcgagtcgagcacggctgtgtacaaa
aaagtgtataatgccaccgatctggcgctcgctttgaaaaagaactccggtgtcaaagtc
gtcgaaattatgaacgaccttgatctaggatggaatgagatcccaagcacggcgcaggct
tcgccttttgccaagcataacgatgccctgacccatccagtcttgaagcagacgggtgtc
agcaaaattacggtggacggcttcaatggcctgaccattttctccgcaaacgggtccaag
atcaaacatgcttctattaccgtgaaacgcagctccaacgtcatcatccgcaacctggag
ttcgatgagctgtgggaatgggatgaatccaccaaaggcgactatgacaaaaacgattgg
gattacattacactggaggacagtagcggcatatggattgaccactgcaccttcaataaa
gcctatgacggactcgttgattcgaaaaaaggaaccagtggcgtgaccatctcctggtct
accttcaaaggggatgacggcagctcgaacagttgggttacccgccagatcaacgagctg
gaagccaacaaagcttcctatcccatgtacaaccacctgcgtagcagcgcggtcggtcta
agcaaggaagatatcattgccatcgctggttcgcagaaaaaaggtcatctcgtgggtgca
accagtctggaatcgacgaacgccaatctctctataaccttgcaccataacgtctataaa
gacattcaggatcgtatgccgcgtctgcgcggcggcaacgcacatgcctacaacatcatc
atggatgccaccgatgcccgtgcagcacaggcgcgtataagcaatgctatggcagcagct
attgcatccaaaggttacaaattcggaattaccagcaatggagccatttccactgaaaac
ggggctgtgctggttgagaaatcagtgatcaaggatgtgcaatacccggtgcgcaacaat
cagacggacccgaccaatgccacgtacacaggtaaaattagcgtagcagatacgatctac
tcgctggatggcagctccttccgtggcagcagtgatacggcgggcagtccgctggctcca
gttccggctgcaatcaagcctttctcgtggaacggcttctcatccctgccttacagctat
caggcagacgatccgtctacactgaatgcacgtctgacagcctctaacggtgcaggtgca
ggcaaagtgaactggtccaaggataactggctgaagacgagctactaa
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