Paenibacillus barcinonensis: HUB98_15840
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Entry
HUB98_15840 CDS
T06922
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbac
Paenibacillus barcinonensis
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_15840
Enzymes [BR:
pbac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HUB98_15840
DNA repair and recombination proteins [BR:
pbac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HUB98_15840
Prokaryotic type
HUB98_15840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKS57630
LinkDB
All DBs
Position
complement(3470027..3471379)
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AA seq
450 aa
AA seq
DB search
MKLFIHRKDLRTDDLSAFDYLRAQEEESLHVLIYDPFLLRQGREKEHSGMNFLRHAAALD
RMYQEKGQRLHTAYGKPAEVLEWVLRHLKGRISEVVVHRDMTPYAIDRDRELRKVCESSQ
IPFTQLTDHLLMDLKAFAEYTGKPEPYKVFAAFHRRWLEFMHAYPNPPSSVTIQDVNVSD
YLLEWPDGMKVPSNLLQAVSGKQEEQEEDPHMLLDRFISQRVTDYAEHRDEFEAYEPSHL
SSYVAVGAVSIRKMFDAAQRAGEAEEWIRQLCFRDYYLYRAVYEEHYFTYEKKYDLSALH
DTHFERWCKAETGIPIIDAAMTELNETGRMPNRLRILTAMFLTKNLQCPFTLGEAYFRRK
LKDYDNIQNRGNWLWCASLGENAAPYFRVNNPVTQSEKYDAQGDYIRKWLPELKHVHSKD
IHQPRKDAIVDLKTSRQAAIDVYKQILTSR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttattcatacaccgtaaagacctgcgtacagatgatctgagcgcatttgattat
ttgcgagcacaggaggaagagagcctgcatgtgttgatctatgatccatttctgctacgg
cagggccgggagaaggaacacagtggtatgaatttcctgcgtcatgcagcagcattggac
agaatgtatcaagaaaaagggcaacggttacatacggcttatggcaagccggccgaggtg
cttgagtgggtgctgcgccatttgaagggcagaatcagcgaggtagtggttcatcgagat
atgacgccgtatgcgatagacagagacagggagctacgtaaagtatgcgaatcctctcag
attccttttacgcaactgacggatcatctgttaatggatttgaaagcttttgctgaatat
acaggcaagcccgagccttataaagtatttgctgcgtttcacaggcgttggctggaattt
atgcatgcatatccgaatccgccgtcatccgtaaccattcaggatgtaaacgtcagtgac
tacctgctggaatggccggatggaatgaaggtgccctctaatttgctgcaggcagtttcc
gggaaacaggaagagcaagaggaagacccgcatatgctgctggatcgtttcatatcccag
cgagtgacagattacgcggaacatcgggatgaattcgaggcatatgagccgagtcatctt
agctcgtatgttgcggtgggagccgtgtctatccgcaagatgtttgacgccgcgcagcgt
gcaggcgaagccgaagagtggatcaggcagctgtgcttccgcgattattacttgtacaga
gcggtctatgaggagcattattttacgtatgaaaaaaaatatgatctctccgctcttcac
gatactcattttgagcgctggtgcaaagcggagacgggcatcccgattattgatgcggct
atgacagaactgaatgaaaccgggcgtatgcctaatcggcttcgtattctaactgcaatg
tttctaaccaaaaatcttcaatgtccctttacgcttggtgaagcgtatttcagacgcaag
ctgaaggattatgataacatccagaatcgggggaactggctgtggtgtgcctcgctgggc
gagaatgctgcgccctatttccgtgtgaacaatcccgttacacagtccgagaagtatgat
gctcaaggagattacattcgcaagtggctgcctgaattaaagcatgtgcacagcaaagat
attcatcagccgaggaaagatgcgatcgtcgacctgaagacctccagacaagcggcaatt
gatgtttacaaacaaattctgacgagtcggtag
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