Paenibacillus barcinonensis: HUB98_16940
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Entry
HUB98_16940 CDS
T06922
Name
(GenBank) oligopeptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUB98_16940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbac02000
]
HUB98_16940
Transporters [BR:
pbac02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HUB98_16940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF7537
Motif
Other DBs
NCBI-ProteinID:
QKS57821
LinkDB
All DBs
Position
complement(3757323..3759149)
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AA seq
608 aa
AA seq
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MKKVLFSRALFFTMMLVFVLALAACSEKEAATPAPGAKTEEGKTEEKPAKEEGVYSIEDF
SNVKKNEGTAIEGGSLTFGLVSDTAFEGTLNYNFYSGNPDSQVLQWFDEGLLTWDKDYVY
TNDGAATYETSEDGKTFTLTIRDNVNWHDGKPVTAEDLQFAYEVIGSKGYDGPRYDSNFT
SVVGMDEFHAGKAKTISGIKVLSDKKISITYKEATPSLLTGGVWTYPLAKHIFGGMDVAK
MSSSKEVREKPIGFGPFKIETITPGESVTFVKNEDYWRGTPKLDKVTLKVINPTTVVQEL
KSGGVDLVDAFPTDQYKDNANLSNVEFLGAIDRAYTYIGFKLGTWDAANNKVKSNPDAKM
GDKNLRKAMWMAVDNDQVGKRFYNGLRWNATTLIPPSHPEFHDSSNPGVKYDPEAAKKLL
DEAGYKMNGEFRTKPDGSPLEINFISMTGGDTAEPLARYYVQSWAAIGLKVNLEMIEFNN
FYDRVGNTGKDDPNVDVYQAAWGVGIDVDPSGLYGRDALYNFPRFSSEENDKLLARGISA
EAFDVEKRKEIYNEWQQYMVDEVPVFPTLYRAVVAPVNKRVMNYAIGDGTGVYLSDLAVN
ADKPVVAQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggtattgttttcacgagcactatttttcacgatgatgctggtctttgtattg
gcgcttgcggcgtgctccgaaaaagaggcagcaacacctgcaccgggagcaaaaacagaa
gaaggaaaaacggaggaaaagcctgcgaaagaagaaggggtttactctattgaagacttc
agtaatgttaaaaaaaatgaaggtactgcaattgaaggtggatctttgacttttggtctc
gtatccgatacagcgttcgaaggaacattgaactataacttctattccggtaatccggat
tcacaggtgctgcaatggtttgacgaaggtttgctgacttgggacaaagactatgtctac
acgaatgacggcgcagcaacatatgaaacttccgaggatggtaaaacattcacacttacc
attcgtgacaatgtaaactggcatgatggcaagccggtaacggctgaagacttgcagttt
gcatatgaggttattggtagcaagggctatgacggcccacgttatgattctaacttcaca
agtgtagtaggtatggacgagttccatgctggaaaagcaaaaacaatctctggtattaaa
gtgctgagcgacaaaaaaatcagcattacgtataaagaagcaacaccatccctgctgaca
ggcggcgtatggacatatcctctcgctaaacacatcttcggtggtatggatgtagcaaaa
atgtcttcttccaaagaagtacgtgagaagccaatcggttttggtccatttaaaattgaa
accatcactcctggtgagtctgtaacttttgttaaaaacgaagactactggcgtggaact
ccaaaactggacaaagtgacattgaaagtaatcaacccgacaacggttgttcaagagctg
aagtctggcggtgttgatctggtagatgccttcccgacagatcagtataaagataatgca
aacctgtccaacgttgaattcctgggtgcaatcgaccgtgcgtatacgtacatcggtttc
aaactgggaacgtgggatgctgcgaacaacaaagttaaatctaaccctgacgccaaaatg
ggagataaaaacctgcgtaaagcgatgtggatggctgtagataatgaccaagtaggtaaa
cgtttctataacggtctccgctggaatgcaacaacgctgattccgccttctcaccctgag
ttccatgattcaagcaatccaggtgtgaaatatgatccggaagctgctaaaaaattgctt
gacgaggctggttacaaaatgaacggtgaattccgtacaaaaccggatggatcaccactt
gaaatcaactttatttctatgacaggtggcgatacagctgaaccgcttgctcgctattat
gttcaatcttgggcagccatcggcttgaaagtaaacctggaaatgatcgagtttaacaac
ttctatgatcgtgtaggtaacacaggtaaagatgatccgaatgtagatgtgtatcaagcg
gcttggggcgttggtatcgacgttgatccatcaggcttgtacggacgcgatgctctgtat
aacttcccacgcttctctagcgaagagaatgacaaattactggcacgtggtatctctgcc
gaagcatttgatgtagagaaacgtaaagagatctacaatgaatggcagcaatacatggta
gatgaggttccagtattccctacgttgtatcgtgccgttgtagctccagtaaacaaacgt
gttatgaactatgcgattggtgatggaacaggtgtctacctgagtgacttggctgtaaat
gcagataagccagttgtggctcaataa
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