Paenibacillus barcinonensis: HUB98_17125
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Entry
HUB98_17125 CDS
T06922
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pbac
Paenibacillus barcinonensis
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbac03032
]
HUB98_17125 (gyrA)
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_17125 (gyrA)
Enzymes [BR:
pbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HUB98_17125 (gyrA)
DNA replication proteins [BR:
pbac03032
]
Prokaryotic type
DNA Topoisomerases
HUB98_17125 (gyrA)
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUB98_17125 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
QKS57855
LinkDB
All DBs
Position
3793479..3796031
Genome browser
AA seq
850 aa
AA seq
DB search
MAEEMNSQIKDRDIGVEMRESFMDYAMSIIVSRALPDVRDGLKPVHRRILYAMSELGMTP
DKPHKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSLRYMHVDGHGNFGSVDGDMAAA
MRYTEARLSKIAMEMLRDINKDTIDFQPNYDGEENEPVVLPARFPNLLVNGVGGIAVGMA
TNIPPHNLGEVIDGVQAMIKNPDITSMELMDYIQGPDFPTSGYILGRSGIRQAYQTGRGS
VTMRARTNIEENNNKARIVVTELPYQVNKARLVEKIAELVRDKKIDGITDLRDESDRNGM
RIVIELRRDVNPGVVLNNLYKHTSMQSTFGINMLAIVNKEPKILNLREVLYHYLQHQIEV
IRRRTQFELKKAEARAHILEGLRIALDHIDEIIALIRSSSNTDAAREGLIERFSLSHDQA
QAILDMRLQRLTGLERERIENEYNELMVKIREYREILANEHLVLEIISTELQEIRERFGD
DRRTEITVGEESILDEDLIPREEVIITITHSGYVKRLPVSTYRSQKRGGRGVVGMDTKDT
DFVEHLFVTNSHNYLMFFTDKGKVYRLKAYEIPELGRTARGTPIINLIQIEQGESVNAVI
PVQEFESDKYLFFATRQGVVKKTPLEDYTNIRKGGLIGISLRDDDSLIDVKLTDGQQEII
MGTAHGMSIRFSEGNVRSMGRSATGVKGITLDDQDAVIGMDVVDTALDVLIVTAKGYGKR
TPVSDYRMQTRGGKGIKTINVTEKNGAVVSLKMVKTEEDLMIITSSGTLIRMSMDGISTM
GRYTQGVKLIHIRDEDAVATVSRIDKNEEEPDEDSVEVAEAEASFDPDSTLEEGLTSGAE
VEGEDSGSEE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaatgaactcgcagattaaagatcgggatattggcgtcgagatgcgtgaa
tcgtttatggattatgcgatgagcatcattgtaagccgtgccctgcctgatgtgcgtgac
ggattgaagccggttcaccggcgtattctgtatgcaatgtctgagcttggcatgacacct
gataaaccccataaaaaatcggccagaatcgtcggggaagttatcggtaagtatcaccct
cacggtgactctgcggtatatgagacgatggtacgtatggctcaagatttctccctgcgt
tatatgcatgtggatggacatggtaacttcggttcagttgatggagacatggctgcagcg
atgcgttataccgaggcacgtttatccaaaatcgcgatggaaatgctcagggacatcaac
aaggatacgattgatttccaaccgaactatgatggtgaggaaaatgaaccggtggttctg
ccagctcgctttccgaacttgcttgttaacggtgtaggcgggatcgccgtcgggatggcc
accaatattcctcctcataatctgggagaggttattgacggcgtacaagcgatgatcaaa
aatccggatattacatccatggaactgatggattatattcaggggccggatttcccgaca
tcgggttatattctgggacgttcaggcattcgccaggcttaccagactggacgcggatca
gtaacgatgcgtgccagaacgaatattgaagagaacaacaataaagcccgcatcgtcgtt
acggagcttccgtatcaggtgaacaaggcaagactcgttgagaaaattgctgaactggta
cgtgacaaaaaaatcgacggaatcacggatctgcgtgatgaatctgaccgtaacggtatg
cggattgtgatagagcttcgtcgagacgtaaatcctggtgttgtgctgaataacttgtac
aagcatacttccatgcagtccacgttcggtattaacatgctggcgattgtgaacaaagag
ccgaagattctgaatctgcgtgaagtgttgtatcactacctgcagcatcagatcgaggtt
attcgcagacgtacccagtttgaactgaaaaaagcagaggctcgtgcgcacattctggaa
ggtttgcgtattgcactggatcatatcgacgagatcattgccttgattcgttcgtccagc
aatacagatgccgctagagaaggattaattgagcgcttctcactcagccacgatcaggct
caggcgattctggatatgcgtctgcaacgtttgacaggcttggaacgcgaacgaatcgag
aacgaatacaacgaattgatggtcaaaattcgcgagtatcgtgaaattttggctaatgaa
catcttgtacttgagatcatcagtacagagcttcaagagattcgtgagcgttttggcgac
gatcgccgtaccgagattactgtgggagaagaaagcattctcgatgaggacctgattccg
cgtgaagaggttatcattacgattacacactcgggttacgtgaaacgtttgccagtatcg
acataccgcagccagaagcgtggagggcgtggtgttgtagggatggatacgaaggatacc
gattttgtcgagcatctgtttgtaaccaattctcacaactacctgatgttctttacggat
aaaggtaaggtgtatcgtttgaaagcatacgaaattccggagcttggacgtacagcacgc
ggaacaccaattatcaatctgattcagattgagcagggagaatccgtcaatgcggttatt
ccagttcaggaattcgagagtgacaagtatctattctttgcgacacgtcaaggtgtagtg
aagaaaacaccacttgaggattacacaaacatccgtaagggtggtctgattggtatttcc
ttgcgtgatgatgatagtctgattgatgtgaagctgacagacggccagcaggagattatc
atgggtaccgctcacggaatgtctattcgtttctcggaaggcaatgtacgttccatggga
cgtagtgcaaccggggttaaaggtatcacactagatgatcaggatgcagttatcggcatg
gatgttgtcgatacagctctggatgtactcattgttacggccaaaggatacggtaaacgt
acaccagtcagtgactatcggatgcagactcgtggcggtaaaggaatcaaaacgatcaat
gttaccgagaaaaacggcgctgtggttagcctcaaaatggttaaaacagaagaggatctc
atgatcatcacgtccagtggtacgttgattcgtatgagtatggacggcatctcgactatg
ggtcgttatacacagggtgtgaagctgattcatatccgtgatgaagatgctgttgctacc
gtcagccgaattgataaaaatgaagaagaaccagatgaagatagcgtcgaagtagcggaa
gccgaagcatcctttgatccagattcaactctggaagaagggctgacgtctggagcggaa
gttgaaggcgaggattcaggttctgaagaatag
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