Paenibacillus barcinonensis: HUB98_17230
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Entry
HUB98_17230 CDS
T06922
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
pbac
Paenibacillus barcinonensis
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HUB98_17230 (rnmV)
Enzymes [BR:
pbac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
HUB98_17230 (rnmV)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
QKS57872
LinkDB
All DBs
Position
3818584..3819129
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AA seq
181 aa
AA seq
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MIKEVIVVEGRDDTVAIRRAVEADTIETGGSAINQRVLKRIALAQERRGVIILTDPDHAG
ERIRKIIANKIPGCKHAFIPEADATRKGDIGVENASPEAIRHALARVHTSYEGAPALIDW
EDLIDAGLIIHPQAAARRMEMGNLLGIGYCNGKQFHKRLSVFQITREEFSAALAQIEREG
M
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagaggttattgtggtggaaggtcgtgacgatacagtagcgatccgccgggcg
gttgaagcagacacgattgaaacagggggatcggcaattaatcagcgtgtgctgaagcga
atcgcacttgctcaggagagacgaggtgtaatcatcctgacagatcccgatcatgcggga
gagcgaatccgcaaaattattgcaaataagattccaggctgcaagcatgcatttattcca
gaggcagatgcaacgcgtaaaggcgatattggggttgagaatgcatctccagaagccatt
cgtcatgcactggcacgcgtacacacttcctatgagggtgcacctgctcttattgattgg
gaggatctgattgatgcggggctgattattcacccacaggcggctgcacgacggatggag
atgggcaatctgctcggaatcggatactgtaacggcaagcagttccacaaacgactgagc
gtatttcagatcacaagagaagagttctccgctgcactggcgcaaattgaacgtgaagga
atgtga
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