Paenibacillus barcinonensis: HUB98_17710
Help
Entry
HUB98_17710 CDS
T06922
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03030
DNA replication
pbac03430
Mismatch repair
pbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUB98_17710 (dnaX)
03430 Mismatch repair
HUB98_17710 (dnaX)
03440 Homologous recombination
HUB98_17710 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbac03032
]
HUB98_17710 (dnaX)
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_17710 (dnaX)
Enzymes [BR:
pbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUB98_17710 (dnaX)
DNA replication proteins [BR:
pbac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUB98_17710 (dnaX)
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUB98_17710 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_30
DnaX_C
AAA_5
TIP49
AAA_22
AAA_16
AAA_19
RCF1-5-like_lid
AAA_assoc_2
AAA_7
AAA_14
AAA_2
Rad17
PIF1
nSTAND3
DUF6395
AAA_28
Mg_chelatase
RNA_helicase
DUF815
Sigma54_activat
End3
AAA_18
ABC_tran
TsaE
VapE-like_dom
DUF3138
Motif
Other DBs
NCBI-ProteinID:
QKS57955
LinkDB
All DBs
Position
3920701..3922443
Genome browser
AA seq
580 aa
AA seq
DB search
MEHIALYRAWRPQSFQDMVGQQHIIQTLQNAIREQRTSHAYLFSGPRGTGKTSAAKILAK
AVNCERGPATEPCNECEACRRITSGAVMDVQEIDAASNRGVEEIRDLREKVKYAPTEVRQ
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRLPATIISRCQRFDFRRVSL
EEQTARLALICEQEGMEADHDALQYIARLSDGGMRDALSVLDQISSFTDGRVTYQQVMDM
TGGIASEQFAKLAASLLKGDVGHILQMIEGFMHEGKSADKCMENLLYYFRDLLMIKMVPN
ADKLTDRVLNPESFRDMAESFTKEQLFQMIDTLNRYQSEMKYAVQPQTLFEVALLKLCSI
PASGGAAATAGASSSAPADGGEINKLKQQLAELEKKLDRALKSGLSGGDGASSAPARPAS
RAPVSRSNAPAKLPAHLDQYVTRKGSPEFAEISKKWSQILQRVKEEKVTVHAWFMDGEPV
SLLEDNVLVAFKNNIHRETTEKQANREVIERVLSEQLGRPARLVTMMLRDWTGAMEGASE
TPKEDFKLEPEHEDGGSGDKQPWIDEAIQLFGEDLVVIKE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggagcatatcgcgttataccgggcgtggcgtcctcagtcgttccaggatatggtggga
caacagcacattattcagactttgcagaacgcgattcgtgaacagcgaacttcccatgcc
tatttgtttagcgggccgagagggacggggaagacgagtgctgccaaaattttggccaaa
gctgtaaactgtgagcgtgggcctgcaacggagccttgtaacgaatgtgaggcttgccgc
cgaattacgagcggtgctgtgatggatgtgcaggagattgacgctgcatccaatcggggt
gttgaggaaatacgggatctccgggaaaaggtaaaatatgccccgaccgaggtccggcaa
aaggtttatattattgatgaagtgcacatgttgacgacagaggcgttcaatgctttactc
aaaacattggaagagccgccgccacatgtgatgtttattttggcgacaacagaaccgcat
cgtctgccagcgaccattatttcgcggtgtcaacgatttgattttcgccgtgtatctctg
gaggagcagacagccagattggctttgatctgtgaacaggaaggcatggaagctgatcac
gatgcgttacagtacattgctcggttatccgatggggggatgagggacgcgctaagcgtg
ctggatcaaatctcttcatttacagacgggcgtgtgacgtatcagcaggttatggatatg
acaggtggcattgcttcggagcaatttgccaagctcgcagcatctttgcttaaaggggat
gttggccatatcctgcagatgatcgagggttttatgcatgaaggtaagagtgcagacaaa
tgtatggagaatctgctatattatttccgggatttgctgatgatcaagatggtgccgaat
gcggacaagctgacggaccgggtgttgaatcctgaatcatttcgagatatggcggaatcg
ttcaccaaggaacagttgttccagatgattgatacgctgaatcggtatcaaagcgaaatg
aaatatgcagttcagccgcagacattatttgaggtcgcactgcttaaactgtgtagtatc
ccggcttcgggcggggcagctgcaacggcaggagcttcttcttcggcgccagcggatggt
ggagagatcaacaagctcaagcagcagcttgccgagcttgagaaaaagctggatcgagcg
ctcaaaagcggtctttcgggtggggacggtgcttcaagtgcacctgccagaccggcgtcg
cgtgcgccagtgtccagatctaatgctccggcaaagctgccagcgcatctggatcaatat
gtaacgcgtaaggggtctcctgagttcgcggagatcagcaaaaagtggagtcaaattttg
cagcgtgttaaagaggagaaggtcacggtgcatgcctggtttatggatggagagccggta
tcgctacttgaagataatgtgctggttgcttttaaaaacaacattcaccgtgaaacgacg
gagaaacaggcgaatcgtgaagttattgagcgtgtgctttccgaacaacttgggcgtccg
gcgcggcttgtgacgatgatgctcagagattggacgggggcgatggaaggagcttctgaa
acgccaaaggaggattttaagcttgaacctgagcatgaagacggcggttcaggcgataaa
cagccttggattgatgaagctatccagctatttggcgaggatctcgtggtcattaaagag
tag
DBGET
integrated database retrieval system
