Paenibacillus barcinonensis: HUB98_18105
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Entry
HUB98_18105 CDS
T06922
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
pbac
Paenibacillus barcinonensis
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbac03000
]
HUB98_18105
Transcription factors [BR:
pbac03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HUB98_18105
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
Peripla_BP_2
HTH_AraC
AraC_binding
HTH_3
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
QKS58009
LinkDB
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Position
complement(3998334..4000049)
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AA seq
571 aa
AA seq
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MMNSYTSHAPSSLTFALLHIRQLYGEEGNTPRFDIHKLIYITSGQGWLQWKDKPPCPVRS
GSCFLFSPETAYHLSTEEEEAPLQGYELVFDGIRIIEAYHAKGQIRRVPARLPYEGEICW
YEQPQIGQMIDQLYARRAQSDERQEFQRQRLFMELLDHVWEQADWLETSAPDINPAIQRS
ILYMEQQYDQELTREQLAQIADMSPGYYSSLFRKETGTSPMDRLAEIRIKHAKQMLVSSD
KPIREIAQSVGFSTPYYFSSRFKQVVGLPPTAYVQRNQERSIASSLLYTAHLRASSSPAA
AENRPPERIVGLFLEDHLTVLGIQPVVQYSRSSYYQRYLSSALDGVQKLDVSHIDFSLLR
GLRPDLILLGFPDFAADARYEQFAGIAPTYVFQQAGLDWRSTLMSIAGLVHREEQARQAI
QRYDEQARKAKQELEGMIGDETVALLRYHFREGLCLYGGPESYTGSVLYEDLGLNMPPLL
QEWSRHPTGAVIPVRPESLSQLEADHLLVIVDDAQTEQAQLLFQSAYWTELGAVQNNQVY
MGTTDVWMTFGVLGHERKIQQVLDSMRSRRK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcatatacatcgcatgccccttcatctctgacctttgcgcttctacatata
agacagctgtacggggaggaaggaaatacacctcgcttcgacatccacaagttgatctat
attacttcagggcaggggtggctccaatggaaggacaagccgccatgtcccgtgcgttca
ggaagctgctttttgttctcgccggaaacggcatatcatctctctacggaggaagaagaa
gcacctctgcaagggtatgaactcgtctttgacgggatacgcatcatcgaagcttaccat
gcaaaaggacagatccggcgtgtacccgcaagattaccgtatgaaggagaaatctgctgg
tacgagcagccacagatcggccagatgatagatcaattatatgcaagacgtgcacagtct
gatgaacgacaggagtttcaacgtcagcggctcttcatggagctgctggatcatgtatgg
gaacaggcagactggttggaaacctcggctccagacatcaacccggccattcagcggtcc
attctctatatggagcagcagtacgatcaggagctgacccgcgagcagcttgcacagatc
gctgatatgagccctggttattattcatctctatttcgcaaagaaacgggtacaagcccg
atggacaggcttgccgaaattcgaatcaagcatgcaaaacaaatgctggtctcttccgat
aaacctatacgcgagatcgcccaatctgttggcttcagtacgccatattacttcagctca
cgctttaaacaggtggtgggcctgccgccaacggcatatgtacagcgtaatcaagaacga
agcatcgccagctccctgctgtatactgcgcatctgcgtgcttccagttccccggcagca
gccgaaaaccgaccgcctgagcgaattgtcggtctctttctggaggatcacttaactgta
ctgggcatccagccggtggtgcaatattcacgctccagttactatcagagatacttgtcg
agcgctctggatggagtgcagaagctggacgtcagccacatcgactttagcttgctacga
ggcttgcgccccgatctgatcctgctcggctttcccgattttgcagcagatgcacgatat
gagcagttcgcggggattgcccctacgtatgtattccagcaagccggattggactggcga
tcaacattgatgagcatcgcgggtctggtgcaccgggaggaacaagcccggcaagctatt
caacgttatgatgagcaggcacgaaaggccaagcaggaactggaagggatgattggagat
gagacggtagcgttgcttcggtatcatttcagggaaggattatgcttgtatggtggacct
gaaagctacaccggctctgtgttatacgaggatttaggcctaaacatgccaccgttgctt
caggaatggtctcgccaccctacaggtgcggtcattccggtcagacccgagagtctaagc
cagcttgaagcagaccatctactggttattgtggacgatgctcagactgaacaggcacag
ctgctgtttcaaagtgcttattggactgaactcggcgcggttcaaaacaatcaggtgtac
atgggtacaaccgatgtctggatgacctttggtgtgctcggacatgaacgaaaaattcag
caggtgctggactccatgcgcagccgcagaaaataa
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