Paenibacillus barcinonensis: HUB98_21305
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Entry
HUB98_21305 CDS
T06922
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUB98_21305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Motif
Other DBs
NCBI-ProteinID:
QKS58522
LinkDB
All DBs
Position
4711706..4716865
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AA seq
1719 aa
AA seq
DB search
MLKKVGLCLLAALLALTSFSWPQMTSVSAAAGYTDVWIPNGGGKIINQGDMPSWNNNIKN
FDANSFGIFAGGAPGTSVDKNKIRSFSAGHVQADGFGTFTAKISVANNLSLRRLAEPGQA
KMLLKIGSVDALMNSAQFLVIINGKVKFEQLSGGSVNSSWIAFDSNDTIEIHMGGFFKGA
SDIELYFADITPPTYNGNTFTHNGVVRFNADPAVQKNELFLKQGSYMNLALNFSEPVFPS
FAEDASDRVNDRFSFMRTELFSNPGGDGFEPSVYYLTSADSGYSDFANGGLDRNIHARSR
FNFRYQAAMNDSTGNVPIDPKRLVAPSEADRPTFLERMNAAGFTDGAGNPVPAFNGIGTV
PFADNAEPGGTFRTIIDARVPQYSASRNGVQPEVLTGLVLNKGDVVDFTVYLNEQVISAF
KPTEDTWLKFSNGLTAAYVSGQNSNTWTFRMTVPDGKSIETSQLETAALEHAGNPGDGKA
LTDYAGNVLVEPVKKIEWADLSVDNTAPEVNFVYENQDGEVIPEGQYVGNGSFTIQAFDP
DLNGQASKGLFRPGNGSGLVYYVLNQSQADPFAGKNDNFAAVKRFSLTQKQPADELYPSG
YEGVTLSAGQNGIKVKLPDDGTPLNGNWYLHTWTADMTWDSARQRMQYDKGSAERAAYLA
QHPDATPAELEGYYRQHILPNLSDYGNVTQWPLSDYMQDDSNWSYHVGLLKIDNDDPSVV
IGNVVDNNSDNVKATVKATDPTSSIKDNKIQYQFVAAGKNVTASGWQHAALNAAGEVEIT
TLKDPAITKGGRYELHVKAQDVAGHSATAEPKAVDVLVISTKFKAYPGAYAINDGPDFTV
AGIPIDTAEYQYTQSSERPAGNSQWTDFKDAPKETKLGDVAAEKYSFPADKTLNGTWYAH
VRIKQQDTGRYYYYYQEYKFDHLPPTVKFGSQGYLYPMPEQSVQIDVSDTLVDFAGVAAK
NIRYQWIKVVEGHEEQEPDPDGKGWSTSPADRLITLQVDNKKDNGNYRLYVYATDSLGNG
KLFHTSGLFSVFYLSSEPPVGSARLIRTEGPGDDGYTAIMELTVDVPAQEGYFYSVSTNG
GDNWSTWLPYTNYVGVPVDTNDVGQLKSKVRVKFKGFYDNISEIVTPEIQIQDAPAYALA
SLEEIMPVRGGEKVQHGGQNQGQDIVFDLVEGKTVKPTGSNPEMPETLEANKRFKIYRNG
SYSFTVKDGDNTATVFIVVSNFDDTPPVVNVKYSTIAATNGAVKVSLKSSEPIRITNLPT
STKTFHENGEFTFEYEDAVGFTGSVTATVSNIDTTPPEADITLHYNHPDLKALIRYGTGT
AVVDSAGDGYSANGEFTHFAVPTRDNVLASNLIVAQVTPKAGGVPDYQVVSNSSGTNQSS
IVMKSGNKARFSLADAAGNSAKIESDVISTLVGSIPAVDEITMVRVDDDGQIMDDSKLVQ
IGEHGYSKGKVRVSLVMPTAAMEGNVIYAGATPVSSFSGEYTTNGEHSILLSDLLGNKRQ
LNFTIEGLDNTAPTIRLNKTSTTLLQNKPGFSLIEDLGGYVVSDNLSTAENIQVTAAEYV
LEGGQYVDKPLNLNVTGKHTLRYTAKDQLGNVSYALQTVFVRSSDGMFVTANGIPLSDTE
SETAIVNTGIVTFNVSHFRTVASTGGTKLENELGTYDVYYFPGLVREGQMKYIATKVTYK
ELVSKDFKVTLPKAGWYTIVVQNQERERVYSTLLVNRAN
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaaaggtaggattatgcttgcttgcggctttgcttgcactgacctcgttcagt
tggccgcaaatgacttcagtttccgcggcagcgggctacacggatgtttggattccgaac
ggtggcggcaaaattattaatcagggagatatgccctcctggaataacaatattaaaaat
tttgatgcgaacagctttggcatttttgcgggtggtgcgccaggaacatcggtagataaa
aacaaaatcagatcatttagtgcagggcatgtccaagcagatggttttggtacattcact
gccaaaatttcggtagcgaacaatctgtctttaaggcgtcttgctgaacctggtcaagcc
aaaatgcttttgaagattggatcagtggatgcccttatgaatagtgcacaatttcttgtc
attattaatgggaaagtaaaatttgagcagctcagtggcggatcagtgaacagctcatgg
attgcttttgatagtaacgataccatcgaaattcacatgggggggttctttaaaggcgcc
agcgacatcgagctttatttcgcggacatcacaccgcctacatataacggtaacaccttt
acacataacggagttgttcggtttaatgcagatccggctgtacagaagaatgagctattt
ctgaaacaaggcagttacatgaacctagcgctgaatttcagcgaaccggtatttccttcc
tttgcagaggatgcttcggatcgagtgaatgacaggttcagctttatgcgaacagagcta
ttcagcaatccggggggagacggattcgaaccttcggtttattatctgaccagcgcagac
agcggctacagtgattttgctaatggtggattggatcggaacatccatgcacgttccaga
tttaatttccgttatcaggctgcgatgaatgatagtacgggtaatgtcccgattgatccc
aagcgtctggtcgcaccttcagaggcagatcgaccaaccttcctggaacggatgaatgcg
gcaggtttcacagatggggcgggtaatccggttccagcctttaacggcattggtactgtt
ccttttgcagataatgcagaacctggcggcacattccgcaccattatcgatgctcgggtt
cctcaatactcggcatcccgcaacggtgtgcagccagaggtgctgacaggacttgtgctg
aacaagggcgatgttgtcgattttaccgtatatctcaacgagcaggtcatcagtgcattt
aagccgactgaggacacatggctcaaattctccaatggattgaccgccgcttacgtcagc
ggtcagaacagcaatacatggacattccgcatgactgtgccggatggcaaaagcatagaa
acgtcacagctggagacggctgcattggagcatgctggcaatccgggggatggaaaagcc
ttaaccgattatgcaggcaacgtactcgttgaacccgtcaagaagatcgaatgggcagat
ctgtctgtggacaataccgctcctgaagtcaattttgtttatgaaaatcaggatggagaa
gttatccccgaaggacagtatgtgggaaatggttcgtttacgattcaggcgtttgatccc
gacttgaatggtcaggccagcaaaggcttgtttcgtccgggcaacggttcaggactggta
tattatgtgctgaatcaaagccaggctgatccttttgcagggaagaacgataactttgca
gctgtgaaacgattttctctgacgcagaagcagccagcagacgagctatacccctcagga
tatgagggagtgacactgtcagcagggcagaacggcatcaaagtaaaactgcctgatgac
ggtacacccctgaacgggaattggtacctgcacacatggacagcggacatgacatgggat
tctgcgcgtcaacggatgcagtatgacaagggaagtgcggaacgggccgcttatcttgcc
cagcacccggatgcaacccctgcggagctggagggatattatcgacagcatatacttcct
aacctttcggattatggaaacgttacgcaatggccgctttccgattacatgcaggacgac
tcgaactggtcttatcatgttggtttgctcaagatcgacaacgatgatccaagcgttgtg
atcggcaatgtggtagacaacaattcggacaatgtgaaggctacggtcaaagcgacggac
ccaacctcttccattaaggataataagattcagtaccagtttgtagcagcaggcaaaaat
gttactgcttccggctggcagcatgctgcactaaatgcggcaggggaggtcgaaataacg
accttgaaagacccggcaattaccaagggcggtcgttatgagctgcatgtcaaagcacag
gatgttgcgggtcattcagcaacagctgagccgaaagcggtggatgtgctggtcatttcc
acgaaattcaaagcttatcccggcgcgtatgcaatcaatgacggaccggactttacagtg
gctggtattccgattgatactgccgagtaccagtacacccaaagctccgagcgtcctgcg
ggcaacagccaatggactgattttaaagatgcacctaaagaaaccaagctgggcgatgtg
gctgccgaaaagtacagcttcccggccgacaaaacgctaaatggcacatggtatgcccat
gtacgcatcaaacagcaggatactggacggtactattactactatcaggagtacaagttt
gatcatttgccgccaactgtgaaatttggttctcaaggctacttgtatccaatgccggag
cagtctgtacagattgatgtatccgatacgctggttgactttgcaggtgtggccgccaag
aacatccgttaccaatggatcaaggtggtcgagggacatgaggagcaggaacccgacccg
gatggaaaaggctggagcacatcacctgcggatcgcctcatcacgcttcaggtggacaat
aaaaaagataacggaaactatcgcctgtacgtgtatgccaccgatagcttggggaacggc
aaactgtttcacaccagcggtctattctccgtgttttatttaagcagtgaaccgcctgtg
ggcagcgcacgtttgattcgaaccgaagggccgggagatgacggatataccgccattatg
gagctgacggttgacgtaccggcccaggaaggatatttctactccgtgtccacgaatggt
ggagacaactggagtacatggctgccgtatacgaattatgtaggtgtgcctgtggacacc
aacgatgtgggccagctgaagtccaaagttcgtgtgaagttcaaaggcttttacgacaat
atcagcgagattgtaacacctgagattcagattcaggatgctcctgcctatgccctcgct
tcattggaagagatcatgccggttcgcggtggagagaaagtgcagcatggcggacagaat
cagggtcaggacatcgtatttgatctggtagagggcaagacggtgaagccaaccggcagt
aacccggaaatgccggagacgctggaggcgaacaaacgctttaaaatttaccggaacgga
agctattccttcacggtgaaggatggcgacaatacagcgactgtatttatcgtggtttcc
aattttgatgatacgccgccagtagtaaatgtgaaatattcgacgattgcagcgactaac
ggagcagtgaaggtcagtctgaaatccagcgaaccgattcggattacgaatctgccaacc
tcaaccaaaaccttccatgagaatggagagtttacgtttgaatatgaggatgcggtcggg
ttcaccggaagtgtgacagcgacagtaagcaatattgatacaacaccgccggaagccgac
attacgctgcattataatcatccagaccttaaagccttaatccgttatggcacgggtacg
gcagtcgtggacagtgcgggggatggctacagtgcaaacggggaattcactcattttgcc
gttccgacacgtgataatgttcttgcctccaatctgattgtggctcaagtgacacccaaa
gcaggaggggttcctgactatcaggtagtatcaaacagctcaggcacaaatcaatcgtcg
attgtgatgaaatcgggcaacaaagcacgattctcgctggcagatgctgccgggaacagc
gcaaaaatcgaatcggatgttatctcgacattggttggctctattcctgcggtagacgag
attacgatggttcgggtggatgatgacggacaaattatggatgatagcaagcttgtacag
atcggagagcatggatattccaaaggtaaagtacgtgtaagcctggtgatgccaacagcg
gcaatggagggcaatgtcatttatgcgggagcaacgccggtatcgagtttcagtggtgag
tatacaaccaatggtgagcactccatcctgctctcggatctgcttggcaacaagaggcaa
cttaacttcactatagagggtctggataatacggcaccaacaattcgtctcaataaaaca
tctacaacactgttgcaaaacaaaccgggctttagtctgattgaagatctgggtggctac
gtggtgagtgacaatctgtcgacagcagagaacattcaggtaactgcggctgaatatgtg
ctggaaggcgggcaatacgtggacaaaccgctgaacctgaatgttacgggaaaacacacc
cttcgttacactgccaaggatcagctcggtaacgtaagttatgcccttcaaacggtattt
gttcgttcaagtgacggcatgtttgtaacagccaatggcattccgctgtctgataccgaa
tcggaaacagccattgttaacacgggtattgttacgtttaatgtgagccatttccgcaca
gttgcttctacgggtggaaccaagctggagaatgagctcggcacatacgacgtgtattac
ttccctggacttgtgcgagaaggacagatgaaatatatcgcaaccaaagtaacgtacaag
gaactggtcagcaaggatttcaaggtcacgctgcccaaagccggatggtacaccatcgta
gtgcagaatcaggaacgcgaacgcgtatactccacactgctcgttaaccgggccaattag
DBGET
integrated database retrieval system