Paenibacillus barcinonensis: HUB98_23305
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Entry
HUB98_23305 CDS
T06922
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HUB98_23305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_23305
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HUB98_23305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
QKS58861
LinkDB
All DBs
Position
complement(5211547..5212458)
Genome browser
AA seq
303 aa
AA seq
DB search
MHTVWKGAISFGLVHVPVKMFSATEDKDISMRYIHKVCGSPLAYVRQCPSCEVDVQWEEI
TKGYEYEKGKFVLFEKEELEALNESSSKTITILDFVDLTEIDPIYFQKTYYLSPDQAGSN
AYQLLMNAMRDTGKIGIAKVSIRSKSSLAAIRVLENCLAMETIFYPDEIRPVSQVPNLPE
VQNVNEKELTMAKLLIDQLSTPFEPDKYNDDYRTKLLDLIQHKVAGEEIKIAPAKPEANV
MDLMAALQASIEAVKPIAADPGTTTAKPKKRTPRKTATQAAAGGENDAAVTPKRKKASSK
PKT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagtctggaaaggcgccatcagtttcggtctcgttcatgtcccggttaaaatg
ttctcagccaccgaggacaaggatatctccatgcgatatattcacaaggtctgcggcagt
ccgctcgcttatgttcgccagtgcccctcctgtgaggtggatgtccagtgggaagagatc
accaaaggctatgaatatgaaaagggtaaatttgttctgttcgaaaaagaagaactggaa
gcattaaatgagtccagcagcaaaaccataaccattctggattttgtagacttaactgaa
attgaccccatctattttcagaaaacctattatctttctcctgatcaggctggaagcaac
gcttatcagctgctgatgaacgccatgcgagacacaggtaaaatcggcattgccaaggtc
tcgattcgctccaaaagcagtctcgccgccattcgtgtgctggagaactgtttggcgatg
gaaactatattctacccggacgagattcgcccggtatcccaggtccccaaccttcctgaa
gttcagaatgtcaatgaaaaggaactgaccatggccaagctgttaatcgaccagttatcc
acaccatttgagcctgacaaatacaatgatgattaccgaacaaagctgcttgatcttatt
cagcataaggttgctggagaagagattaagattgcacctgcaaaacctgaagcaaatgtc
atggatctgatggctgcccttcaagccagtatcgaagcagttaagcccattgctgcagac
cctggtacaacgacggccaagccaaaaaaacgcactccgcgtaaaacagccactcaagcc
gctgccgggggagaaaacgatgcagctgtcacacccaaacgcaagaaggcatcctccaag
ccaaaaacataa
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