Paenibacillus barcinonensis: HUB98_23385
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Entry
HUB98_23385 CDS
T06922
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUB98_23385 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbac03019
]
HUB98_23385 (groL)
03110 Chaperones and folding catalysts [BR:
pbac03110
]
HUB98_23385 (groL)
03029 Mitochondrial biogenesis [BR:
pbac03029
]
HUB98_23385 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbac04147
]
HUB98_23385 (groL)
Enzymes [BR:
pbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HUB98_23385 (groL)
Messenger RNA biogenesis [BR:
pbac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HUB98_23385 (groL)
Chaperones and folding catalysts [BR:
pbac03110
]
Heat shock proteins
HSP60 / Chaperonin
HUB98_23385 (groL)
Mitochondrial biogenesis [BR:
pbac03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HUB98_23385 (groL)
Exosome [BR:
pbac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HUB98_23385 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HUB98_23385 (groL)
Exosomal proteins of breast cancer cells
HUB98_23385 (groL)
Exosomal proteins of colorectal cancer cells
HUB98_23385 (groL)
Exosomal proteins of bladder cancer cells
HUB98_23385 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QKS58872
LinkDB
All DBs
Position
5227349..5228980
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFSEDARRSMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQALITEGLKNVTAGASPIGIRKGID
KAVKAAVAELQSISKPVETKQSIAQVAAISAADEEVGELIAEAMEKVGKDGVITVEESRG
FATELEVVEGMQFDRGYISPYMITDTDKMEAVLDNPYILITDKKISSTQDILPLLEKIVQ
QGKPLVLIAEDIEGEALAMLVVNKLRGTFNAVAVKAPGFGDRRKAMLQDIAALTGGQVIT
EELGLDLKSAVVEQLGTARQIRVTKENTIIVDGAGNKSDIDARVSQIRTQLEETTSEFDK
EKLQERLAKLSGGVAVIKVGAATETELKERKLRIEDALNATRAAVEEGIVSGGGTALLNV
YHAVAGVALSGDEQTGVNIVLKALEAPIRTIAANAGEEGSVIVERLKKEQVGVGFNAATG
EWVNMIEAGIVDPAKVTRYALQNAASVAAMFLTTEAVIADKPEPAGAAGAPDMGGMGGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagacattaaattcagtgaagacgctcgtcgctccatgcttcgtggtgtggat
gcattggctaacgcagtgaaagtaacgctcggaccaaaaggccgcaacgtggttctggag
aaaaaattcggaagcccgcttattaccaatgacggtgtaacgattgctaaagaaatcgaa
ctggaagatgcattcgagaacatgggtgcacaactggttaaagaagtagcaaccaaaaca
aacgatgttgccggtgacggtacaacaactgcaactgtattggcgcaagcgctgatcaca
gaaggcttgaaaaacgtaactgcaggtgctagcccaatcggtatccgcaaagggatcgac
aaagcggttaaagctgcggttgctgagctgcaatccatctccaaaccggttgagactaaa
caatccatcgcacaagtagcggcaatctctgcagctgacgaagaagtaggcgaactgatt
gctgaagctatggaaaaagtgggtaaagacggcgtaatcactgttgaagaatcccgcggg
ttcgcaacagagctggaagtggttgaaggtatgcaattcgaccgcggatatatctctcct
tacatgatcacagatacggacaaaatggaagctgttctcgacaacccgtatatcttgatc
acagacaaaaaaatctccagcacgcaagacatcttgccattgcttgagaaaatcgttcaa
caaggcaaaccactcgtactgatcgctgaagatatcgaaggcgaagctctggcgatgctg
gttgtgaacaaactgcgtggtacattcaatgctgtagcggttaaagctccaggattcggt
gaccgtcgtaaagcaatgctgcaagatatcgctgctctgactggcggccaagtaattacg
gaagaactgggtctggacctgaaatccgcagttgtggagcaactgggtacagctcgtcaa
atccgtgtaaccaaagaaaacacaatcatcgttgacggtgcgggtaacaaatccgatatt
gatgcacgtgttagccaaatccgtacacaactggaagaaaccacttccgagttcgataaa
gagaaactgcaagagcgtctggctaaattgtccggcggcgtggcggtaatcaaagtcggt
gcggcaactgaaactgaattgaaagaacgcaaactgcgtatcgaagatgccctgaacgca
actcgcgctgcggttgaagaaggtatcgtatccggtggtggtactgcgcttctgaacgta
tatcatgctgttgctggtgtagcattgtccggtgacgagcaaacaggcgtaaacatcgtg
ctgaaagctctggaagcgccaatccgcacaattgcggctaacgctggtgaagaaggttcc
gtaatcgtggaacgtctgaaaaaagagcaagttggcgtaggcttcaatgctgcgactggc
gagtgggttaacatgatcgaagcaggtatcgttgaccctgcgaaagtaacacgttatgca
ttgcaaaacgcggcttccgtagcagcaatgttcctgactactgaagcggttatcgctgac
aagccagaaccagcaggcgctgctggcgctcctgacatgggtggcatgggcggtatgggc
ggcatgatgtaa
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