Paenibacillus barcinonensis: HUB98_23755
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Entry
HUB98_23755 CDS
T06922
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUB98_23755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_23755
Enzymes [BR:
pbac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HUB98_23755
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HUB98_23755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QKS60343
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All DBs
Position
5301505..5302611
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AA seq
368 aa
AA seq
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MLKIGSHVSFSDKGLLSATKEASSYGSSSFMIYTGAPQNTRRKPIESMFIEEGKQAMQAG
GFEEIVVHAPYIVNLGSYKDSTYRLAVDFLQEEIRRTHAIGVKNIVLHPGAFTDKDAHYG
IERIAQGLNEVLDGIQETDVNIALETMAGKGTEMGRSFEEIAQIIEKVTYNERLTVCMDT
CHIHDAGYDIVNNLDGVLDEFDRTVGLDRIAVMHINDSKNAAGARKDRHTPIGSGWIGFE
AINRIVNHEKLNNRPFILETPWIGKDAKTQRPMYEIEIALLRGDVEGRFGQEFLTDVEQL
QHFFKGKEVQSRSYVLDVWTLLKNDAKAKKADPREPLERLYDMVIEAALFPHLNEEQVNH
RLIAWLAG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatcggctcccacgtgtccttttcggacaagggattattgagtgcaacgaag
gaagcgtcctcgtacggttccagttcgtttatgatatatacgggtgcaccgcagaatact
cgccgcaagcctattgaatccatgtttattgaggaaggcaagcaggcaatgcaggcaggc
ggatttgaggaaattgttgtccacgccccttatatcgttaatctgggctcttataaggac
agcacgtacagactcgctgtagattttcttcaggaggaaattcgtcgtacccatgccatt
ggtgtgaaaaatattgtcctgcatcctggtgcgtttacagacaaggatgctcattatggc
attgagcgtattgcacagggtctgaatgaagtgctggatggcattcaggagacggacgtg
aatattgctttggagacgatggctggcaaagggaccgagatgggccgcagcttcgaggaa
attgcccagatcatcgagaaggtaacttataatgaacgtctgactgtgtgtatggataca
tgtcatattcatgatgccggttatgatattgtcaataatctggatggagtgctggacgag
tttgatcgtacggtcggacttgatcgaattgctgtaatgcacatcaacgacagtaaaaat
gctgcgggggcacgcaaggaccgacatactcctattggatcaggatggatcggttttgaa
gcgatcaatcgcattgtaaaccatgaaaaattaaacaatcgtccatttattctggagacg
ccttggattggtaaagatgccaaaacgcagcgcccgatgtatgagattgagattgcattg
ctgcgaggagatgtagagggccgtttcggtcaggaattcctgaccgacgttgaacagctt
cagcatttcttcaaaggcaaggaagtgcagtctcgttcctatgtgctggatgtatggaca
ttgctcaaaaatgatgccaaagccaaaaaagctgacccgcgtgaaccgctggagcggttg
tatgacatggtaatcgaagcggcattgttcccgcatttgaatgaagagcaagtgaatcat
cgcttgattgcttggcttgcagggtaa
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