Paenibacillus barcinonensis: HUB98_24890
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Entry
HUB98_24890 CDS
T06922
Name
(GenBank) S-layer homology domain-containing protein
Organism
pbac
Paenibacillus barcinonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Motif
Other DBs
NCBI-ProteinID:
QKS59118
LinkDB
All DBs
Position
5507299..5516226
Genome browser
AA seq
2975 aa
AA seq
DB search
MKRFPLYIRKKSAKQLISAILSVVLIFAFIPFSAFAEDVVNAADISIETPAPVNGASITN
GTIVFGRGTVADVKWSSDGVTYGAAAGSFAQSTLYQTKYVFTADTNHVFDPTPGAYAKGG
ERDLSSRITNLGTGTFTAEVSQGFTLNDTLTVVISWPNATIEAADISIGTAAPLTDAVIE
NGTNTFNHASADITWSSTGSSFGPASGNFAPGTIYYTQYLITTDSGYAFDNTNRIYQNGS
KNVSSRIAHIGTGEIVRATVSTTTHANDTLTLIVMWESTKKATGQAVIGPSDLTIGTAAP
APSAVVADGSNEFKRGKVDYAEWYTSNNSQELHPGDSFISGTTYRTGYHLIAASGYAFDT
PSAYQKGGARDLTSRITNLGSGTFNISSPDGDDLYIDVYWPKTGEISPADILIGTDAPVA
EASMANGANTFKHASSSIAWSSDNGATYQTASGTYAFETTYKTKYIIEATAGYFFDPTAG
VYASGGSKSLNNSITNLGSGTYTAVVSGTSDNTLTVEVTWPRTTAAVQSKIDASGIAIGT
DAPVTGASMTSGTNTFAHAGSTITWSADQGTTYTAANGTFAPGTSYRTKYVLTADTGYIF
DAAAGAYKGVSVANLGKGEFKAEVSTTSTANDTLTITVTWPTTSSATIAVSDLVIGMPAP
AAGEGITDGSNTWTNTQASITWSSDNGAHYASANGFFAPNTSYRTKYVLTAASGYQFDDA
ADAYHSIVVTHIGSGTFSVDVSSVTTTNDTLTIVVSWEATAAATISAADLLIDTSAPSTN
ASQTNGTNQFNHAVANVTWSADGGQTYGAAHGTFEAATIYKTRYVIKAAAGFTFDASTGV
YNQNGARDLTSRITNLGTGTFTASVSTTDVLNDTLTVIVTWPSTSSAIIQPEDIVIGTAA
PVTGAAQTNGSNVFNKSTASITWSADHGSTFQPASGTFAIGKVYQTKYVLTALSGYQFDR
SIGGYSSISIANRGTGTFTVQVSTTSLPDDTLTIIVTWPQTSLADTVKVSLNDASNIRAY
SGSTPIAAQGISLPAAEDYSIILVNTSMNTLEPSAPPTAAMVKSVKVTDSQGNNVLKSVR
AVSNGAAQNHPWSLEITINKNETSISRNIMVKVEVGTALRIDIRNLVGFTKPGVEYADKS
NGREQYPYEYGNYYYFLPGDSLLMQTRSSGLIPAGVQIIGTRTSRTTAITNTLFDTVNYQ
FRYTFMMPDEPVFLSVTSTDGKAAHDIKVSATIQNVVVPALSGGATFVPATASKPAMDHS
GDIVTVDPGSYDHRMYKVTGVEVRSELLNVVLPVTKNGDGTYSFAMPFTHAIVTVVVERI
TSNLVQTEVKNNNSAQVIANLEQYYAGDSLKLQITNTDPTKYVSSIQIWRVVDELLTLER
QGKPVNPYASKMDFDIKPYASTVSLIAGAKLKAVVNYEDISIPVSTNNPAQFSNVPAKVK
FNEPITFTFAPPGDNSKIYKPEVKFRDALQPDMTTVLACTFVRTDAQDQSRSEYTCPAVT
KSSTASVELLYDSVNVASTVGAAKIKRMASISPNSRLAGTFNSIMVYGTDMNGRGDVYLG
TAPDPADKANVTQTTSSSLVVSIPASLLSRTKDVTYYVSINGVQRSVTIPTAQNLIHSSF
GNMAIVSDNAFNHSVIVAQSEKELGQQLGNREAVVTLKGKFKLSETVAGEYGFEGTTIIN
GGVTSYLPAGQSSFKVKDDGDGSVKIMMKRVNLVAGSFSLISSSDGSIELEKGVEYIKEY
AKDDDGELLDENQQNVEISFDNHNQLTVLGSGMTAQITGATLLGNTMVFDGKVYLGMSLP
GSGSMGFGLQIDRLQYGADGQGSLNFQGVRADGYFTPGNDMSKKLLGGFGVGASAEGTID
TFKGQYGLAFDVDAKLANFAAEMGLKRDSTNGRFIPDTIKIVVGLSEGIPITPAMPIAQL
TRVGGGVTGLADTITGNYKGIAPILILINGDLEVGSLLPGHGLLEFNDVELTIGPSQISL
SGNPTLMKMEIFDQFQAGIYVTNTSVSYQMKVAANILKNFSVILAGGNANLTYSRDGSSN
LNGQLHGRLQVPKVNVGVLSLGPYTITDSDIGLSKTNAYATFRVLGFGMKVNYAFGSNAV
SVGRLALRSLPNSQPEQGRESGETVYDENGAAVGQMYTFSNIKEVASSQAPISLKTPNLT
PRITTNDSGDVHTVSFPAGMMDDYALLVSADSKDIRITDPEGQPYGLTYADTLKDGTPFY
NDPNANALVVSDDTLMIRLSALTGNWTISSSKPFFSSVIDVQPIPEIANVQYDPGNRNVK
WDLTGLDTEKENYRVEVRLSTDNGDDRTQAAAGVLVHTLDVNETQVTDGVAAGNYSFTTQ
DLTYLQSGKYFPRLTLVGVPKSETSNIIPYASLNAKQPMDVINPLTPDAVSEVLAVPGGS
GTIHATWSAVSDADGYLVRLLDAEGNTVMSPLSYTDELDNNGKATGKKIAHAGQPIEYQV
QADNAVNGTVDLDFGGMEPGTSYQLAVIPYAKADSSPSNTSYIYGASTMTSLVHVPQVKA
PVIHVASSLGVMTSDALTGSLLTVNGDFKLEAAATYVNPEDGQSKELPAKFTVWQSDGTL
DEQTNLPKFHPIYASTQAERQISVPVALDGEAGSSLIRIVAENEQGDVSEYGLGVHFNRL
PPALFVETGQDANVTTDAAGRYQVQGSTVPYASVRDSLGNRTNADAEGKFSIKGTLTTAA
KTLVTLTAVDRVGNFAQDDITIVRDYTPANPGNGNPTDSGGHTGGQTGGGQTHSEPSVTS
GSSGSSPQDHGSTGAGQEGNTGNEEGPPHSSFRDVQSEAPWAAEVIERAYAKGIVSGIKP
GIFAPNLNTRRDEVIAMLVRAKQLNVGIQADMEASAAYFTDWNELSAWSKPYIAAAYANG
LISGLTKNGKHYILGATYVTRAEAAVLFQNAYHLSADASGRKVYTDNIPSWAAESVDILS
SHGIINGYLNSTFRAGAKATRAEIVVMLMRLIERN
NT seq
8928 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatttccattatacatacgaaaaaaaagtgcgaaacagctcatatcggcaatt
ctgtcggttgtgcttatttttgcttttattccatttagtgcattcgcagaggatgtagtt
aatgccgcggatatatctattgaaacgcccgcaccggttaacggagcaagcataacaaac
ggaacaattgtattcggcagagggacagttgcggatgtaaagtggtcgagtgatggcgtc
acgtatggagcggccgctggcagctttgctcagagcacgctttatcagaccaaatatgtg
tttacagcggatacgaatcatgtctttgaccctactcctggcgcttatgcaaagggcggg
gaacgggacttgtcgagccgaattaccaatctgggcacgggtacgtttacggctgaggtt
agtcaaggattcaccttgaatgatacgctgactgttgtaattagctggccgaatgcaacg
atcgaggccgcggatatttctattggcacagctgcaccacttacagacgcagttatagaa
aatggcacaaatacatttaaccatgcatcagcagatattacatggtcatccacaggaagc
tcctttggtccggcgagcggtaattttgcgccaggtaccatttattacacacaatacctc
atcacaactgattcaggctatgcttttgataacaccaatcgaatctaccagaacggaagc
aaaaatgtgtcgagccgaatcgctcatatcggaacgggcgagattgtaagggctacggta
tccaccacgactcatgctaacgacacgttaacgctcattgttatgtgggaatcgaccaag
aaagcaacgggacaggcagtcattggtccctctgatctgacaattggtaccgctgcgcca
gcaccttctgccgttgttgcggatggaagtaatgaattcaagcggggcaaggtggattat
gcggagtggtatacatccaacaattcgcaagagcttcatcctggagattcctttatatct
ggtacaacatatcgaacagggtatcatctcattgcggcaagtggttatgcattcgatacg
cctagcgcgtaccaaaaaggcggagcaagagacttgacgagccgaatcacaaaccttggc
tcgggaacattcaatatatccagtccagatggggatgatctgtacatcgatgtgtattgg
cccaaaacaggtgaaatttcaccagcagatatcttgatcgggacggatgcaccggttgca
gaagccagcatggcgaacggtgcaaatacattcaagcatgcgtcctccagcatcgcatgg
tcctctgataacggtgcaacctatcaaacggcaagcggaacgtacgcgtttgagacaaca
tacaagacgaaatacatcattgaagcgacagcaggatatttcttcgacccaactgcagga
gtgtatgcttcaggtggctccaaatccctgaacaacagcattaccaatttaggctcaggc
acgtacacagctgttgtatcgggcacatcggataatacgttaacggttgaagtgacatgg
ccccggacaactgcggcagtacaaagcaagattgatgccagtggaatagctataggtaca
gatgccccggtcactggcgcaagtatgaccagcggaaccaatacattcgcgcatgccggc
agcacgataacctggtcggcggatcaagggacaacatatacggcagcgaatggtacattt
gcacctggaacgagctatcggacaaagtatgtactgactgcggatacaggatatatattt
gatgcagcagcaggagcatataagggagtatctgttgccaatctgggcaagggagaattt
aaagccgaggtttccacaacgagcacagcaaacgacacattgaccattacagtgacttgg
ccgaccacgtccagtgcaaccattgctgtatccgatctggttatcggcatgcctgcacca
gcagcaggagagggtataactgacggcagcaacacatggacaaatactcaggcgagcatc
acatggtcaagtgataacggtgcacattatgcgtcagccaatggtttttttgctccgaat
acgagctatagaacgaaatacgtactgactgcggcaagcggatatcagttcgatgacgca
gcagatgcctatcattcaattgtggttacgcatatcggttcaggcacattcagcgtggac
gtatccagcgtaacaaccaccaatgatacgctaacgattgttgtgtcatgggaggcgaca
gccgctgcaacgatctctgcggcagatctcctgattgatacgagtgctccgtcaacgaat
gcatcgcagacaaacggcacgaatcagtttaaccatgccgtcgctaacgttacctggtcg
gctgatggtgggcaaacttatggcgctgctcacggtacgtttgaagccgcaacgatctat
aagaccagatatgtaatcaaggctgcagcaggttttacatttgacgcaagtacaggtgtg
tataaccaaaatggagcgagagatctcaccagtcgcattacgaatctcggaacgggtacg
tttactgcatccgtatctacaacggacgttttaaacgatacactcaccgtcattgtcacc
tggccgagcaccagctccgcgatcattcaaccggaggatattgtaatcgggacagcggct
ccggtgacaggcgctgctcaaacgaatggcagcaacgtttttaacaagtctacagcaagc
attacctggtcggccgatcatggcagcacatttcaacctgcaagtggcacatttgcaata
ggaaaagtgtaccaaaccaaatatgtacttactgcgttgtccgggtatcaatttgatcgt
tcaattggaggttatagctccatcagcattgccaatcggggtacaggaacattcaccgtt
caagtctcaacgaccagcctgcctgatgatacgttaaccatcattgtgacctggccgcaa
acctcgcttgcagatactgtaaaggttagccttaacgatgcaagcaacattcgggcatat
tcgggcagcacaccgattgcagcacaggggatatcgctgcctgctgcggaggactacagc
attattctggtaaacacttcaatgaatacgctggagccttctgcaccaccgaccgcggcg
atggtgaaaagcgttaaagtcaccgatagccaaggcaataatgtgttaaaaagcgtgcgg
gctgtgtcgaatggtgctgctcagaatcatccatggagtctggaaattacgatcaacaaa
aacgaaacatccatatccagaaatattatggtcaaggttgaagtaggcacagctctgcgg
attgatattcgcaatctggtgggcttcaccaaaccgggtgtcgagtatgcagacaaatcg
aatggaagagaacagtatccttatgaatatggtaactattattactttctgccaggtgac
tcattactgatgcagacccggtcttcggggctgattccggcgggggttcagattatagga
accaggacgtcgagaacgacagcgatcaccaatacgctatttgatacggtcaattatcaa
ttccggtacaccttcatgatgccggatgagcctgtctttttgtcagtgacctcaacggac
ggaaaggctgcgcacgatattaaggttagtgccacaattcagaatgttgtggtgcccgct
ttatccggaggcgcaacctttgttccagccacggcgagcaagccagcaatggatcattcg
ggggacatcgtcaccgttgatccgggtagctatgatcatcgcatgtacaaagtgacaggt
gtggaggttcgttctgagctgcttaatgtcgttttgccagtgacgaagaacggagatggc
acgtattcgtttgctatgccgtttacccatgccatagtgaccgttgttgttgagcggata
acctcgaatctggtgcagacagaagtcaaaaataacaacagtgcgcaagtgattgcgaat
cttgaacaatattatgctggggattcactcaagctccagattacgaacacggaccctaca
aaatacgtatcttccatccagatttggcgagtggtggacgagttgcttacgcttgagaga
caggggaagcctgttaatccctatgcctcaaaaatggattttgatataaaaccttatgcg
tcaaccgtttcgttaatagctggtgcaaaacttaaggctgtcgtgaattacgaagatatt
tcgatccccgtatcaacgaataacccggcacaattttcgaatgttccggctaaagtcaag
ttcaacgagccgatcacgttcaccttcgcgccgcctggggataacagcaaaatatacaag
ccggaagtcaagttccgtgatgcgcttcagcccgacatgacaaccgttctggcttgtaca
tttgtgagaacagatgctcaggatcaatccagaagcgagtatacctgtccagctgtgacg
aaaagctccacagcatcggtcgaactgttatatgactctgtaaatgtagcgtccactgta
ggggcagcgaaaataaaacggatggcgtccatttcaccaaactcaaggcttgcaggaacg
tttaattccattatggtatatgggaccgatatgaatggccgtggagacgtatatctgggg
accgcacctgatccggcagacaaggccaatgtcacacaaacgacttccagttcgcttgtg
gtcagcatacctgcttcgctgctttcccggacaaaggatgttacttattatgtgtccatc
aacggtgtgcagcgatcggtaaccatcccgacagcacagaatctgattcacagctcgttc
gggaatatggcgattgtttccgacaatgcatttaatcattcggtcatcgtggcccaaagc
gaaaaggaattggggcagcagctaggaaatcgcgaagctgttgtcacgttaaaaggaaaa
ttcaaactcagcgaaactgtggcaggtgaatacgggtttgagggaaccacaatcattaac
ggcggtgtcaccagttatctgccagccggccagagcagtttcaaagttaaagatgatggc
gatggcagtgtgaagatcatgatgaagcgtgttaatctggtcgccggatcatttagtctg
atttcctcatcggatggctccattgagctggagaagggcgttgaatacattaaagaatac
gctaaagacgatgacggggaattgctggacgagaaccagcagaatgtagaaatttcattt
gacaaccataaccagcttactgtgttggggagcggtatgactgcccaaatcactggtgcc
acgctactgggcaatacgatggtgtttgacggcaaagtgtatcttggtatgtctctcccc
ggcagtggcagcatgggattcggtcttcagattgaccgtctgcaatacggagcggatggt
cagggaagtctgaactttcagggagtacgggctgacggatattttactccagggaacgac
atgtctaagaagctgctcggcggtttcggtgtaggggcatccgcagaaggaacgattgat
acgttcaaggggcagtatggccttgcttttgacgtagatgcgaagcttgcgaactttgcc
gccgagatggggttgaaaagggacagcacgaacggaagattcatcccggatacgatcaaa
atagtcgttggcttgagcgagggaattccgatcacccctgcaatgccgatcgcacagcta
acgagggttggaggcggggttacgggactcgcggatacaatcactggaaactataaggga
atagctccgattctgattttgatcaatggcgatcttgaggttggaagtctgcttcccggt
catggcttgcttgaattcaatgatgttgaacttacgattggaccatcccagattagcttg
tcgggcaatccaacactgatgaagatggagatttttgatcaattccaggcaggtatctac
gtaaccaatacatccgtttcctaccagatgaaagtcgctgctaatatactaaagaacttt
tctgttattttggcaggcgggaacgccaatctgacttattccagagacggcagttccaat
ctgaatggtcagttgcatgggcgtcttcaagtgccgaaggttaacgtgggcgttctcagt
ttagggccgtatacgattacggacagtgacattggccttagcaaaaccaatgcgtatgcg
acgtttcgtgtacttggctttggaatgaaagtaaattacgccttcggaagcaatgccgtc
agtgtgggtcggcttgcgttgcgttctctgccgaattcgcagcctgagcaggggcgagag
tcaggggaaacggtatatgacgagaacggtgcagccgtcgggcagatgtacaccttctcc
aatatcaaggaagtggcctcgagtcaagcaccaatctccttgaagacgcctaaccttaca
ccgaggattacaaccaatgattcgggggatgtgcatacggtatccttccctgcgggcatg
atggatgattacgcgctgctggtgtcggcagactcaaaggatatccgtattacggacccg
gaagggcagccatacggcttgacgtacgcggatactctgaaggatggaacgcctttttat
aatgatcccaatgccaatgcgttggttgtatccgatgacaccttgatgattcgtttaagt
gccctgaccggaaactggacgatatcgtcaagcaagccgttcttcagctcggtcattgat
gtgcagcccattccagagattgcaaacgtgcaatatgacccaggcaaccggaatgtgaag
tgggatctgacagggctggatacggaaaaggagaactatcgggttgaagtaagattgtct
accgataatggggatgatcggactcaagcggctgcaggcgtactggttcataccttggac
gtgaatgagacgcaagtaacagatggtgtggcagcaggaaattattcgtttactacgcag
gatttaacttatttgcagagcggcaagtatttcccgaggctgacgttggttggcgtaccg
aagagtgaaacgtccaatatcatcccctatgcgagcttgaatgcaaagcagccgatggat
gtgattaacccgctgacaccggatgcagtaagtgaggtgcttgctgttcctgggggaagc
ggcacaattcacgcaacctggagcgcagtttcagatgcagacggttatctggttcgtttg
ctggatgcggagggcaatacagtgatgtcacctttgtcgtatacagatgaattggacaat
aacggcaaggcgacaggaaagaaaatcgctcatgcaggacaacccatcgaatatcaggtt
caggcggacaatgccgtaaatggcacagtggatcttgattttggcggaatggagccaggt
acgtcatatcagcttgctgtgataccttacgccaaggcagattcatcgccatcgaatacg
tcgtatatttatggtgcttctacaatgacctcgcttgtgcatgtgccgcaagtgaaggcc
cccgtgattcatgtggcgtcaagtctgggcgtaatgacaagtgatgcgctgacaggtagt
ttgcttacagtcaatggtgatttcaagctggaggctgcagcgacctatgttaatccggag
gacggtcagtcgaaggaactacctgcgaagttcactgtttggcaaagtgatggtacactc
gatgaacagacgaatttgccgaagtttcatccaatttatgcaagcacccaagcggagcgg
caaatatctgttccggtcgctttagatggggaagctggctcaagtctgatccgaattgtg
gccgaaaatgagcagggggatgtgtcggagtacggtcttggcgtgcactttaaccgcctt
ccaccagctctatttgttgagacaggccaggatgccaacgttacgacagatgctgcagga
cgttatcaggttcaagggagtacagtaccttatgcaagtgtcagggacagtcttggcaac
cgcacaaatgccgatgcggagggcaagtttagcataaaaggtacactgactacagctgcg
aaaacgttggtcactttaacggcggttgatcgtgtgggcaatttcgctcaggatgatatc
accattgtgagagattatacgcccgcaaatccgggaaacggaaacccaacggattcaggc
ggtcataccggaggacagacaggcgggggacagacacatagtgaaccatccgttacatca
ggatcatcgggcagtagtccacaggatcatggatcaacgggtgcggggcaagaggggaat
actggaaatgaagaaggtcctccccattccagcttcagggatgtacagtccgaagcccca
tgggctgcagaggtgattgaacgagcttacgcgaaaggcatcgtgtccggtataaaacct
ggtatatttgctccgaatctgaacacgcgaagagatgaagttattgcaatgcttgtcaga
gcaaagcagttgaatgtgggcattcaggctgatatggaagcatcagcagcctatttcaca
gattggaacgagcttagcgcatggagcaaaccttacattgctgccgcttatgcaaacggg
ttaatatcgggtctgacgaagaatggcaagcattatatccttggagcaacttacgttact
cgagcagaggctgccgtattgttccagaatgcttatcatttatcggcagatgcatcggga
cgtaaggtgtataccgacaacattccttcctgggcagcagagagcgtggatattctctca
tcccatggcataatcaacggttatctaaactccactttcagggctggagcgaaggcaaca
cgggcagagattgtagtgatgttaatgcgtctgattgagcgtaattaa
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