Paenibacillus barcinonensis: HUB98_25295
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Entry
HUB98_25295 CDS
T06922
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HUB98_25295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_25295
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HUB98_25295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Herpes_UL25
Spore_III_AA
Spectrin_SESTD1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKS59186
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Position
5602347..5604713
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AA seq
788 aa
AA seq
DB search
MDTKILHTLEYRKILNTLLGFAQTSMGKKKAEQLEPIGELEEVKRLLQQTDEAFTFDRLK
GSPSFGGIVDITASVKRAEIGGTLNPHELLGISNTTHTARRLKRQIAALHEDEPIESLFY
ISDQLSEQKDLEDAIRICIDDNAEVADTASVTLAQIRRELRGGEARIREKLDSMIRSSTV
SKMLQDQLITIRGDRFVIPVKAEYRSYFGGIVHDQSGSGATLFIEPESIVAMNNKLRETR
IREEREIEIILQKLTALVSEQGEWLLYDVDLLASLDFIFAKARLARELKATLPRMNDRGF
LKLKKGRHPLIPIEHVVPIDIELGNDYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFV
PAEDGSQLCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILKNMTPKSLVLLDELGAGT
DPAEGSALAISMLEHMHRTGCRMVATTHYSELKAYAYERKGVINASMEFDINTLSPTYRL
LVGVPGRSNAFAIAERLGLPGYILDYARGEVKEEDQRIEHMIASLEENRLTAEQERAKAE
TLRQDMEKLRSRHQTELEKLEQQRDRRIEKAEEDARSIVDKARAEAEKIIADLRQLAMEE
GASVKEHKLIAARKQLDEAEPEKRRKTVKKSDSPKVRAIGPGDEVLVYSLNQKGHVVEMA
GSKDAVVQLGIMKMKVSLDDLELQQAAPAVKQPKQKPVTGMKRTRDDNVKSELDLRGTNL
EEALMETDRFIDEAFLANLGMVYIIHGKGTGILRSGIQDYLRKHKHVKSYRLGNYGEGGN
GVTVAELE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
ttggacacgaaaattttacacacgctggaatatcgcaaaattttaaatacattgctcggc
ttcgcccaaacgtcaatgggcaagaaaaaagcggagcaacttgagccaattggcgagctg
gaggaagtaaaacgtttgcttcaacaaacggacgaagcattcacctttgatcgtttgaag
ggctcaccgtccttcggcggaattgttgacattaccgcttccgtgaaacgtgctgaaatt
gggggcacgctgaatccgcatgagctgttaggtatttccaatacaacgcatacggccaga
cgattgaaacgtcagattgcagcgcttcacgaggatgaaccgattgaatcgctcttttat
atcagtgatcagctgtctgagcagaaggatctggaggatgcgatccgcatctgtattgac
gacaatgcggaggtggcggacactgcaagtgtgacactggcacagattcgccgtgaattg
cgcggaggagaagctcgcattcgtgagaagctggattccatgattcgctcgtctaccgtt
tccaaaatgctgcaggatcagcttattacgattcgtggagatcgttttgtcattccggtt
aaagcagagtatcgctcatacttcggtggtatcgtgcatgaccagtcaggttcaggagcc
acacttttcattgagccggaatccatcgtggcgatgaacaacaaattacgcgagacccga
attcgggaagagcgtgaaattgagatcattttgcaaaaattgacggcacttgtcagtgaa
cagggcgaatggctgttatatgatgtcgatttgctggcatcccttgattttatttttgcc
aaagcacgtctggcccgtgaattgaaagcaacgctccctcggatgaatgaccggggattc
ctcaagctgaaaaagggacggcatccgctaattccgattgagcacgtcgttcccattgat
atagagctgggtaacgactacacttctattatcgtgacgggcccgaacacgggcggtaaa
acggtaacgctaaagacgataggtttattaagtctcatggcgatgtcgggattgtttgta
ccagccgaggatggcagccagctctgtgtatttgatgccatctatgcggatattggtgat
gagcagagcattgaacaaagtctgagtaccttctccagccatatgaccaacatcattcgt
attctgaaaaatatgacgccgaaaagtctcgttctgttggacgagcttggagcaggaacc
gatccggcagaaggctctgcgctggcaatttccatgctggagcacatgcaccggacaggc
tgccggatggttgcaacaacacactatagtgagctgaaggcctacgcttacgagcgtaaa
ggtgtcattaatgcaagcatggagtttgatatcaacacacttagtccgacataccgcctt
ctggtcggtgtaccgggacgcagtaacgcttttgcgattgcggagcgtcttggcttaccg
ggatacattctcgattatgctcgcggtgaagtgaaggaagaggatcaacgaattgaacat
atgatcgcttcgcttgaagagaaccgtctcacggctgaacaggaacgtgcgaaggccgaa
acactccgtcaggatatggaaaagttgcgtagtcgccatcagaccgagctggagaagctg
gagcagcagcgtgatcgccggattgaaaaggctgaggaggatgcgcgcagcatcgtcgac
aaggctcgtgcagaagcggagaaaattatcgctgacctgcggcagcttgcgatggaagaa
ggtgcatctgtcaaggagcacaagctgattgctgctcgcaaacagctggatgaggcagag
ccagagaaacgcagaaaaacggtcaaaaaatcagatagtcccaaagttcgtgccattggt
ccaggggatgaggtactcgtctacagtcttaaccagaagggccatgttgtggagatggct
ggcagcaaggatgcggtggtacagcttggcatcatgaagatgaaggtgtcactggatgat
ctggaattgcagcaagcagcgcctgctgtaaagcagccgaagcagaagccggtaacgggc
atgaaacgtacgcgagatgataatgtaaaaagcgagctggatctgcgcggtaccaacctc
gaagaagcgctgatggagacggatcgcttcattgatgaagcattccttgccaatctgggc
atggtctacattattcacggcaaaggaacaggaattttgcgatccggtattcaagattat
ctgcgaaagcataaacatgttaagagttatcgcttgggcaattacggagagggcggcaat
ggcgtgaccgtcgctgagctggaatag
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