KEGG   Paenibacillus barcinonensis: HUB98_27140
Entry
HUB98_27140       CDS       T06922                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pbac  Paenibacillus barcinonensis
Pathway
pbac03030  DNA replication
pbac03430  Mismatch repair
pbac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HUB98_27140
   03430 Mismatch repair
    HUB98_27140
   03440 Homologous recombination
    HUB98_27140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbac03032]
    HUB98_27140
   03400 DNA repair and recombination proteins [BR:pbac03400]
    HUB98_27140
Enzymes [BR:pbac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HUB98_27140
DNA replication proteins [BR:pbac03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HUB98_27140
DNA repair and recombination proteins [BR:pbac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HUB98_27140
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: QKS59518
UniProt: A0A2V4VF42
LinkDB
Position
5935963..5936700
AA seq 245 aa
MREPARGSTGFWNSLRQGGVPSAIASIMGAPTAQHMAFIRSMMREQRRPEVLHTPLNELD
AVVFDLETTGFSPQHGDEILSFGAVRIRGGVVLEEEQFYTVVQSKALVPKHITELTGITQ
QMTEEAPTLLEGLHDFMSFVGGNVLVAHASAHDRAFLNAALWRTSKVRLTHRLIDTMMLA
RWLEPTRSGYGLDELLESRGIPIYGRHHALEDAKMTAQLWSCYLEDMKHKHVETLGDLYT
RLSHA
NT seq 738 nt   +upstreamnt  +downstreamnt
atgagagagccggcaaggggcagtacaggattttggaattcgctgcgtcagggaggggtt
ccttccgccatcgcttccattatgggggcccctacggcgcaacatatggcgtttatccgc
tcgatgatgagggagcaacgcagaccggaagtgctgcatacccctttgaacgagctggat
gcggttgtgtttgatctcgaaacgaccgggttttctccccagcatggagatgagattttg
tcctttggtgccgtgcgcattcgaggaggcgtcgtgctggaagaagagcaattctacacg
gtggttcagtccaaagcgttggtaccaaagcatattaccgagctaacgggaataacacag
cagatgacggaggaggctccgacactgctggagggactacatgatttcatgtcttttgtt
gggggcaatgtactggttgcacatgccagtgcgcatgaccgtgcgttcctcaatgcagca
ttatggcgaacctccaaggtcaggttgacacaccgtttaattgatacgatgatgcttgct
cgctggctggagccgaccagatccggatatggtctggatgagctgctggaatcaaggggg
attcccatctacggtcggcatcatgcgcttgaagatgccaagatgacagcacaattatgg
tcctgttacctggaggatatgaagcataagcatgttgagacattgggcgacctgtataca
cgcctaagtcacgcgtag

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