Paenibacillus barcinonensis: HUB98_27520
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Entry
HUB98_27520 CDS
T06922
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03420
Nucleotide excision repair
pbac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUB98_27520
03430 Mismatch repair
HUB98_27520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_27520
Enzymes [BR:
pbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUB98_27520
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUB98_27520
MMR (mismatch excision repair)
Other MMR factors
HUB98_27520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
AAA_30
Viral_helicase1
PhoH
DEAD
SLFN-g3_helicase
AAA_16
Catalase_C
NACHT
nSTAND3
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKS59585
LinkDB
All DBs
Position
6023501..6025876
Genome browser
AA seq
791 aa
AA seq
DB search
MSTEQQWHEEQQRVNIVTDLIECRITALEEEVGSFRGEVVEMRKEFWDEVTMNFSEADDV
GETSTSMRQQSQVLSDRERSHLNTAAALDKMKRLRHSPYFGRIDFKEDGYAGAEHIYLGI
ASLLDEKEESFLIYDWRAPISNLYYDGAPGPITYRTPSGEISGEIEMKRQFVIRDRRIRF
MFDTGVTIGDQLLQAVLSRTSDAQMKSIVATIQKEQNRIIRNDRTRMLIVQGAAGSGKTS
AALQRVAYLLYKYREHLQADQMVLFSPNPMFNSYVSTVLPELGEENMLQTTFQEYLERRL
GREYQLEDPFIQLEYVLTGTQEPGYAARMSSIRFKSSASFQKVITRYKESMLSGGMKFKH
VRFQGKVIVDSEAMAEKFYSFGSSVKLVSRLELLRDWLLKELSTYGKSELDAPWVDQQLD
VMEPEDLQRAYQRLKRKQKGKSHTFDDFQQEREILARMVVSDRLKPLRKWIKSLRFVDIR
QLYANLFQDQAQMVRLLDNEPLPAHWEEISTMTLRRLKLQELAYEDITPYLYLRELLLGF
HINSGIRHVIIDEAQDYSAFQLAFMKRLFPHAKITALGDFNQAIYAHSSVLSGTGPLSDL
YGPENTEVIELTRSYRSTMEIVEFTRGMVPGGEQIIPFNRSGEKPKVIVTADRDQHMHHI
TVDLHHLIQQGYESVAVICKTAEESSEVHALLSQKLDTAPKLIKKTTLAFEQGVHVVPAY
LAKGVEFDAVLIYDGSATAYSHEQERKLFYTACTRAMHLLHVYSLGRPSPFITSQSEEWY
EVKDITATRVE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaacagcaatggcatgaggaacaacagcgggttaatatagtgactgatttg
attgagtgtagaatcactgcactggaggaagaagtcggttccttccgtggcgaagtggtc
gagatgagaaaagaattttgggatgaggtcacaatgaacttcagtgaagcagatgatgtc
ggggagacgtcaacaagcatgcgacagcagtcgcaggtgttgtccgacagggagcgaagt
catctgaacacagctgcggctctggataaaatgaaacgactgcgtcattccccgtatttc
ggacgtattgattttaaggaggacggatatgcaggtgcggagcacatctatctggggatc
gcatcgctgctggatgagaaggaggagtccttcctcatctatgattggcgtgcccccatc
tccaacttgtattatgacggtgcaccaggaccgattacctatcgtacgccaagcggcgag
attagtggtgagatcgagatgaagcggcagtttgtcattcgtgacagacgtatacgcttt
atgtttgatacgggcgtcacgattggggatcagctgctacaggctgtgctcagtcgaacg
tcggatgcacagatgaaaagcattgtggcaacgattcagaaggagcaaaaccggattatt
cgcaatgaccggacgagaatgttaatcgtgcagggagcggcaggcagtggtaaaacctct
gctgcgctccagcgggtagcgtaccttctctataaataccgcgagcatctgcaagcggat
cagatggttcttttttcaccgaatccgatgtttaacagctatgtatcaacggtattgccg
gagctaggagaagagaacatgctgcaaacgacatttcaggagtatctggagcgccgatta
ggacgtgaataccagctggaggacccgtttattcaacttgaatatgtacttacaggcacg
caagagccgggatatgctgcacgaatgtcaagtatccgcttcaagtcttctgcatccttt
cagaaggttatcacgcgttacaaggaaagcatgctttccggtggtatgaaattcaagcac
gtgcgttttcagggcaaggtgattgtggattcggaagcgatggcggagaaattttatagc
tttggttcatctgtcaagctggtgagccggctggagctgctgcgagactggctgctgaaa
gagctatcgacatatggcaaaagtgaactggatgcgccttgggtggatcagcagcttgat
gtgatggagccggaggacctgcagcgcgcttatcaacggttgaaacgcaaacagaaaggg
aaatcacatacgtttgatgacttccagcaggaaagagagattttggcccgaatggttgtc
agtgaccggctcaaacctctgcgtaaatggatcaaatccttgcgttttgtcgacatccgt
cagctgtatgcgaatctgtttcaggatcaggcacagatggtgcgtttgctggacaacgag
ccgttgcctgcacactgggaagaaatctcaacgatgacgctgcgcaggctgaagctgcag
gaattggcttatgaggatatcacaccgtatctgtatttgcgagagctgctgcttggcttc
catattaactccggcatccgtcatgtcattattgatgaagcgcaggattattctgcattt
cagctggcgtttatgaaaaggctgttcccgcatgccaaaattacggcgcttggtgacttt
aatcaggccatctatgcccactcgtctgtacttagcgggacaggaccgttaagtgatctt
tacggaccagagaatacagaggttattgagctgacgcgcagttatcgctctacgatggag
attgtagagtttacacggggcatggttcccggcggcgagcagattataccgtttaaccga
agtggcgaaaagccaaaagtcatcgtaactgctgatcgggatcagcatatgcatcacatt
acagttgatcttcatcatctgattcaacagggatatgaatcagttgcagtgatatgcaaa
acagcagaagagagcagcgaggttcatgcgcttctaagtcagaagctggatactgcgccc
aaactgatcaaaaaaacgacacttgcttttgaacagggtgttcatgttgtacctgcttat
ttggcaaagggggtcgagtttgacgcggtactgatctatgacgggtctgccacagcttat
tcccatgaacaggaacgtaagctgttctatacggcctgtacgcgagcgatgcatctgctg
cacgtatattctctaggaagacctagtccgtttattacctcacagtctgaggagtggtat
gaggtgaaagacattactgcgactcgtgtagagtaa
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