Paenibacillus barcinonensis: HUB98_27810
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Entry
HUB98_27810 CDS
T06922
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pbac
Paenibacillus barcinonensis
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbac03036
]
HUB98_27810 (smc)
Chromosome and associated proteins [BR:
pbac03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HUB98_27810 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
Med21
Fib_alpha
DUF2064
Ribosomal_L18_c
Motif
Other DBs
NCBI-ProteinID:
QKS59633
LinkDB
All DBs
Position
6097769..6101338
Genome browser
AA seq
1189 aa
AA seq
DB search
MFLKRIELGGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGK
MEDVIFAGSDARKAVNYGEVSLTLDNEDHALALDFGEVTVTRRVHRSGDSEYFINKQSCR
LKDITELFMDTGIGKEAYSIIGQGRIEEILSTRSEDRRGIFEEASGIVKYKSRKRDATRK
LDETEQNLLRIHDLVTELEDQIGPLKEQSEKAVHYKQLRTELKSKEISMYVYQIEQIHAS
WSKASERLESLKQEEVGLAAIVSTHDAKLENDRNALRRLEDETEELQATLLHFSEATEKS
EGLGELLRERAHHLQANQEQLKETLAVSEERHREREAELLALREKFGKLEHELADVKNRL
SEEEAKLVGVTGGISQQQEESLKGNLLELMNQMAQARNEIRYVDQQKETLERRMSRASEE
SGKWEEQKQTLEGRKAEIQKKVVQLGKEISELRGNYISESERLQSLQKLLEESRGTVRKW
EQKREAQVSRRDTMKEMQDDFDGFMLGVKEVLKASRKGVLNGVHGAVAELVKVPEKVELA
VETAMGAALQHIVMENEAVSRQAIAFLKQRQLGRATFLPLDVIRPRAIGTSERSMVEGME
GFVGIGAELVQYEERYASIIGSLLGNVIIAETLEFANKIAARCQYRFRVVTLEGDVVNAG
GSMTGGSQHKKNGSLLSRKRQLDQLDQDIVDTEQQIVKLHRSVDDVKAQLEQCQDKLDQL
RQSGDDTRNAEQQTSMEMKQVEHELRHVLEQVAVAGQEKSGFTEEIKELDQSRIEAEKKL
EQLEEEEKATHRAIHAAEFARKANESAKEELQSQLTELKVREGKLDQERFSNEEQLRRLE
REVESLVKDLRQNRTLLASMEADFKKTQSESVKQIEDLNEYKLKKAKASQELDFKRAARS
ELSKKLELAESETKEQRTQLKAVEEQMRQTEISVNRLDVELENILRKLTDEYELGYELAK
ERYPVPDDVESTQAEVQKLKRAISALGDVNLGAIEEFERVNERYEFLNEQKNDLVEAKTT
LYQVIREMEDEMAKRFKFTFDAIRREFGTVFTKLFGGGRADLVLMDPERLLETGIDIVAQ
PPGKKLQNLQLLSGGERALTAMALLFAILHVKPVPFCVLDEVEAALDEANVVRFAQYLRE
FSEQTQFIVVTHRKGTMEEADVLYGVTMEEGGVSKLVSVKLEDEEAEIA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgaaacgaatagaattgggtggattcaagtcatttgccgacaaaacggaaatg
gagttcgttcgggggattacagctgttgtaggcccgaacggaagtggtaaaagtaatatc
tctgacggcatccgttgggtgcttggtgagcaaagcgccaagtctctgcgtggtggcaaa
atggaggatgttatttttgcaggcagtgatgcgcgaaaggctgttaactatggcgaggtt
tcgcttacgctggacaatgaggatcatgcgttagctcttgattttggagaagtgaccgtg
acccggcgtgtgcatcgcagtggggacagtgaatattttattaacaaacaatcctgccgc
ctgaaagatattaccgagctgtttatggatacaggtatcggtaaagaagcttattccatc
attggacaaggacgaatcgaggagattttgagcacgcgctctgaggaccgtcggggaatt
tttgaagaggcttccggtatcgtcaaatataaatcacgcaaaagggatgctacgcgcaag
ctggatgagacggagcagaatttgcttcgtatccacgatctcgtaaccgagctggaggac
cagattggtccgctgaaggagcagtccgagaaggcggtgcattataaacagctgcgtaca
gagctcaaatcgaaggaaatttcgatgtatgtgtaccagattgaacagattcatgcttca
tggagcaaagcaagtgaacgactggagtcgctgaagcaggaggaggttggcctggctgct
attgtgtcgacacatgatgcgaagcttgaaaatgatcgtaatgcgctgcgccgactggaa
gacgagactgaggagcttcaagcgactttgctgcatttcagtgaggcgaccgagaagagc
gaggggctcggagagttgcttcgggaacgtgcacatcatttacaggcgaatcaggagcag
ttgaaggaaacgctggccgtgagtgaagagagacatcgtgaacgtgaagctgagctgctt
gctctgcgtgagaagtttggcaagcttgagcatgaactggctgatgtgaaaaatcggttg
tccgaagaagaggccaaattggtcggggtaacaggtggcataagtcagcagcaggaggaa
agtctgaaaggaaacctgctggagcttatgaatcaaatggcgcaggcgcgtaatgaaatc
cgttacgtggaccagcagaaagaaacgctggagcgcagaatgagccgtgcatcagaggaa
tccggcaaatgggaagagcagaagcaaacgctggaaggccgcaaagctgaaatccagaaa
aaggttgttcagctaggcaaggaaatcagcgagctgcgcggaaattacatttcggaaagt
gagcgcctgcagtcgcttcagaagctgctggaggaaagtcgcggcactgtgcgtaaatgg
gagcaaaagcgcgaggctcaggtgtcccgccgggatacgatgaaagagatgcaggatgat
tttgacggatttatgctaggtgtcaaggaagtgctcaaggcttcgcgtaaaggtgtactg
aacggcgtacatggcgcggtagctgagcttgtcaaggtgccagagaaggttgagcttgcc
gtagagacggccatgggtgctgccttgcagcatatcgttatggagaatgaagcggtatca
agacaggctattgcctttctgaagcagcgtcagttgggacgcgcgacctttctgccgctt
gacgttattcgcccacgtgccattggtacaagcgagcgctccatggttgaggggatggaa
ggttttgttggcataggtgccgagcttgtgcagtatgaagaacggtatgcttctattatt
ggcagcttgcttggcaatgtgattattgcagagacgctggagtttgccaataaaattgca
gcgcgctgccagtatcgcttccgtgtggtgacgctggagggcgatgtcgttaatgctggt
ggttccatgacaggtggtagtcagcataagaaaaacggcagcctgctcagccgcaagcgg
caactggatcagctcgatcaggatattgtggacaccgagcagcagattgtgaagctgcat
cgcagtgtggatgatgtcaaagcacagttagagcagtgtcaggacaagctggatcagctc
cgtcagtctggtgatgatacacggaatgcagagcagcagacctccatggagatgaagcag
gttgagcatgaactgcggcacgtgctggagcaggttgctgtagcaggacaggagaaaagc
gggttcacggaagagatcaaggagctcgatcagtccagaattgaagcggagaaaaagctg
gagcagctggaggaagaggaaaaggctacacatcgtgcgattcatgcagcagagtttgcc
cggaaagccaatgagtcagccaaggaagagttgcagagccagttgactgaactgaaggtc
cgtgagggcaagctggatcaggagcgcttctccaatgaggagcagctgcgcagactggag
cgcgaggtggagtcgcttgtcaaggatctccggcagaatcgcacacttctggcttccatg
gaagcagatttcaagaagacgcagagcgaaagcgtgaagcagattgaggatctgaatgaa
tacaagcttaaaaaggcaaaggcctctcaagagctggatttcaagcgtgcagcacggagt
gaactgtcgaagaagcttgaactggcggagagtgaaaccaaggagcagcgcacacagctc
aaagctgtggaagaacagatgcgtcagaccgaaatttcggttaaccgcctcgatgtggag
cttgaaaacattttgcgcaagctcaccgatgaatacgagttgggttatgagctcgcgaag
gagcgttatccggttcccgacgatgtggaaagcacgcaggcagaggtccagaagctgaaa
cgtgccatatcggctcttggcgatgtgaatttgggtgccattgaagagtttgagcgggtc
aatgagcggtatgaattcctgaatgagcaaaaaaatgatctggtcgaagccaaaacaacg
ttgtatcaggttattcgtgaaatggaagacgagatggccaaacgcttcaagtttacattt
gatgcgattcgccgtgagttcggcaccgtatttacgaagctgtttggcggggggcgtgct
gatcttgtgctgatggacccggagcggctgcttgaaacagggattgatatcgtagcccag
ccgccaggcaagaagctgcaaaatctgcagctgttgtccggtggagagcgggccttaacg
gctatggcactgttgtttgccattttacatgtgaagcctgtgcccttctgtgtactggat
gaagtcgaggccgcgctggatgaagccaacgttgttcgttttgcccaatacttgcgtgag
ttctctgaacaaacacagttcatcgttgtaacccaccgcaagggtacgatggaagaagca
gatgtcctctatggggttacgatggaggaaggtggagtctccaagctggtttcggttaaa
ctggaggatgaggaagctgaaatcgcctaa
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