Paenibacillus barcinonensis: HUB98_28215
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Entry
HUB98_28215 CDS
T06922
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbac
Paenibacillus barcinonensis
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbac03016
]
HUB98_28215 (truB)
Enzymes [BR:
pbac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HUB98_28215 (truB)
Transfer RNA biogenesis [BR:
pbac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HUB98_28215 (truB)
Prokaryotic type
HUB98_28215 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Imm1
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QKS59710
UniProt:
A0A2V4VFN1
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All DBs
Position
6180802..6181725
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AA seq
307 aa
AA seq
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MVKPFEGVLPVYKPAGFTSHDVVAKMRRILKMKRIGHTGTLDPQVTGVLPLCLGRATRVV
EYMQELPKEYLATLRLGLATDTEDLTGEVIEHSSSAVEVTRDQVQQVLEQFLGTISQVPP
MYSAVKVDGKRLYELAREGKTVERKSREVTIYELELTGIESNDGTTDISFRALCSKGTYI
RTLCVDIGRKLGFPSTMVKLERTVSAGISAEHCLHIEEVEKRMAEGTLAEALIPVDEAIP
SIPAHKVGEEQMKGALQGQKLSARLLEPPVEQPGLLRLYAQDGTFLGIFERDELKPTVRA
VKVFLPE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagccgtttgaaggtgtgctgccggtgtataagccagcggggtttacttctcat
gacgtcgtagccaagatgcgccgtattctaaagatgaaacgcattggtcacacgggtacg
cttgatcctcaggtgaccggggttctgccgctctgcctagggcgggctacacgagtagtg
gagtatatgcaggagcttcctaaggaatatttggcaacgctcaggctgggacttgcgacg
gatacagaggatctgacgggcgaagtcattgaacattcatcctctgctgtagaagtgaca
cgggatcaggtacaacaggttctggagcagttccttggcacgatctcacaggttccgcct
atgtattctgcggtgaaggttgatggcaaacgtttatatgaactcgcacgcgagggcaaa
acggtcgagcgcaagagtcgtgaagttacgatctatgaactggagctgacgggaatagag
agtaatgacggcacaaccgacatctcttttcgtgccttatgctcgaagggaacgtatatc
cgtacattatgtgtcgatatcggccgcaagctggggttcccgtctaccatggtgaagctc
gaacgtactgtatctgcaggaatatctgcagagcattgtctccatatagaagaggtggaa
aagcgcatggccgaaggcacgctggcagaggcactgatcccggtagatgaagcgattcct
tctattccagcccataaggtcggagaagagcagatgaagggcgcccttcagggtcaaaag
ttgtccgctcgtcttctggagccgccagtggagcagcctgggctgcttcgtctctatgct
caggacggcacgtttctggggatatttgaacgagatgaattgaaaccaaccgtgagggct
gttaaagttttcttgccggaataa
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