Roseinatronobacter sp. S2: P8S53_01710
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Entry
P8S53_01710 CDS
T09279
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pbae
Roseinatronobacter sp. S2
Pathway
pbae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8S53_01710 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbae03021
]
P8S53_01710 (rho)
03019 Messenger RNA biogenesis [BR:
pbae03019
]
P8S53_01710 (rho)
Transcription machinery [BR:
pbae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P8S53_01710 (rho)
Messenger RNA biogenesis [BR:
pbae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P8S53_01710 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
S1CSD-TOTE-2
OB_RNB
ATPase_2
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
WFE76387
LinkDB
All DBs
Position
375033..376331
Genome browser
AA seq
432 aa
AA seq
DB search
MTPDEEFESEEAGSLNLADLKAKSPAELLAMAEYLEIENAPSMRKGEMMFSILKERAEEG
WTIYGDGVIEVLQDGFGFLRSPEANYLPGPDDIYVSPEMIRQYSLRSGDTIEGEIQAPAE
NERYFAITKVTQINFDGPEMARHKVHFDNLTPLYPDERLWMETSDPATKDRSARIIDIVS
PLGKGQRALIVAPPRTGKTVLLQNIAHSIEKNHPDCYLIVLLIDERPEEVTDMQRSVKGE
VIASTFDEPATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLT
GGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLD
RKVADKRVFPAIDILKSGTRKEELLVEKIDLQKTFVLRRILNPMGTTDAIEFLISKLKQT
KTNSDFFDSMNT
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgatgaagaattcgagtccgaagaggctggaagtcttaacctggccgatctg
aaggcgaaaagcccggccgaattgctggccatggccgaatatttggaaattgaaaacgcc
ccgtccatgcgcaagggcgagatgatgttttctatcctgaaggaacgcgccgaagaaggc
tggaccatctatggtgatggcgtgatcgaagtgttgcaagacgggttcgggtttctgcgt
tcacccgaggcgaactatctgcccggaccagatgatatttatgtctctcctgaaatgatc
cggcagtattcgctgcgcagtggtgacacaatcgaaggcgaaattcaggcaccggccgaa
aatgaacgctatttcgcgatcaccaaagtcacgcagatcaatttcgacggcccggaaatg
gcccgtcacaaggttcatttcgacaacctgacgccactttaccctgatgaacgcctgtgg
atggaaacaagcgatcctgccaccaaggaccggtcggcgcggatcattgatattgtgtca
cccttgggtaaagggcagcgcgccctgattgttgcgccgccgcgcactggtaaaaccgtt
ctgctgcaaaacatcgcccacagcatcgagaagaaccaccctgattgctaccttatcgtt
ctgctgatcgacgagcgcccggaagaggtgacagacatgcaacgctccgtcaaaggagag
gtgatcgcctcgacctttgatgagccggcgacgcggcacgttgctgtgtctgaaatggtc
attgaaaaggccaagcgccttgtggaacacaaacgcgatgttgtcatcttgctggattcg
atcacccgccttgggcgcgcatttaacacggttgtgcccagctctggcaaggttctgacc
ggtggtgtcgatgcgaacgccctacagcgccccaagcgcttctttggggccgcacgcaac
atcgaagaaggagggtcactgaccattattgcaactgccctgatcgacaccggctcgcgc
atggatgaagtgatctttgaagaattcaaaggcaccggtaacagtgaaatcgtgctggac
cgcaaagtagcggacaagcgcgtattccccgcgattgatattctgaaatcgggcacccgg
aaagaggaactgctggtcgagaagattgaccttcagaaaacctttgtcttgcgccgtatc
ctgaacccgatgggcacaacagatgcgatcgagttcctgatatccaagctgaagcaaacc
aagacaaacagcgatttcttcgattctatgaacacataa
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