Roseinatronobacter sp. S2: P8S53_02290
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Entry
P8S53_02290 CDS
T09279
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbae
Roseinatronobacter sp. S2
Pathway
pbae00300
Lysine biosynthesis
pbae00470
D-Amino acid metabolism
pbae01100
Metabolic pathways
pbae01110
Biosynthesis of secondary metabolites
pbae01120
Microbial metabolism in diverse environments
pbae01230
Biosynthesis of amino acids
Module
pbae_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P8S53_02290 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P8S53_02290 (dapF)
Enzymes [BR:
pbae01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
P8S53_02290 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
DUF3335
Motif
Other DBs
NCBI-ProteinID:
WFE75257
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Position
497314..498138
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AA seq
274 aa
AA seq
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MNTPLAFVKMHGAGNDFVIIDSLHRAGGVMTAALAAAIGDRHRGVGFDQLAELRPSDTAD
LDLDFWNADGSRAGACGNATRCVAHMVMAARGLDRLRIRTARGVLIAENRQGQIWVNMGA
PLLNWQDIPLAQDCETDHLPIAGDPAAVGMGNPHCVFFVADADSAPVAEQGRKTEHHPLF
PQSTNVEFASVTALDHLRLRVWERGTGITLACGSGACATAVAAHRRGLTGRQVRIDADGG
QLLVDWRDDGVWLSGPVAHVFDATLPAEFLAGLA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccccctggcctttgtcaaaatgcatggcgctggcaatgattttgtcattatc
gactcgctgcaccgtgcaggcggggtgatgacggctgcgctggctgcggctattggcgac
cgtcatcgcggggtggggtttgaccagcttgcggaattgcgcccctcggacaccgccgat
ctggaccttgatttctggaatgccgacggatcgcgggcaggggcgtgcggcaatgcaacg
cgctgtgtcgcgcatatggtcatggcggcgcgcgggctggaccggctgcgtattcgcacc
gcgcgcggtgtgctgattgccgaaaaccggcaggggcagatatgggtgaatatgggcgcg
ccgctgctgaactggcaagatattccgctggcgcaggattgtgaaaccgatcatttgcca
atagcaggcgaccccgcagccgttggcatgggcaacccgcattgcgttttcttcgtggcc
gacgcagacagcgcgccggtggccgaacagggtcgcaagaccgaacaccacccgctgttc
ccgcaatccaccaatgtggaatttgccagcgtgactgcactggaccacctgcgcctgcgc
gtgtgggaacgtggcacaggcataacgcttgcctgcgggtcgggtgcctgcgcgaccgct
gtggccgcgcaccggcgcgggctgacaggacggcaggtgcgcattgatgccgatggcggg
cagttgctggttgactggcgcgacgacggcgtgtggctgtccggccctgtggcgcatgtg
tttgacgccacgctgcccgctgaattccttgcgggtcttgcatga
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