Roseinatronobacter sp. S2: P8S53_03580
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Entry
P8S53_03580 CDS
T09279
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pbae
Roseinatronobacter sp. S2
Pathway
pbae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P8S53_03580 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbae03021
]
P8S53_03580 (rpoC)
03400 DNA repair and recombination proteins [BR:
pbae03400
]
P8S53_03580 (rpoC)
Enzymes [BR:
pbae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P8S53_03580 (rpoC)
Transcription machinery [BR:
pbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P8S53_03580 (rpoC)
DNA repair and recombination proteins [BR:
pbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P8S53_03580 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BSH_YknX
RPOC_hybrid
DUF7567
Motif
Other DBs
NCBI-ProteinID:
WFE75501
LinkDB
All DBs
Position
772965..777194
Genome browser
AA seq
1409 aa
AA seq
DB search
MNQELTTNPFNPLAQTKTFDQIRVSLASPERILSWSYGEIKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLK
SLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLSYGQLMTEEEFLDAQDQYGADAFT
ANIGAEAIREMLANIDLEDEALRLREELKEAKGELKPKKIIKRLKVVEHFIESGNRPEWM
VLTVLPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQEAVDALFDNGRRGRVITGNNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMVLGLYYVSMMREGMKGEGMIFSSIEEVEHAI
AADEVHLHAKIQCRVMQIDEDGNEVSRRYETTPGRLRLGALLPLNAKAPFELVNRLLRKK
DVQNVIDNVYRYCGQKESVIFCDQIMSLGFREAFRAGISFGKDDMLIPETKWTLVNETRD
QVGSFEQQYLDGLITQGEKYNKVVDAWSKCSDAVANEMMAEISAVLRDAEGRELEPNSVY
MMSHSGARGSPAQMKQLGGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVRSDDCGTELFITAQAAVNDGEVVSSLAERVLGRV
AAEDVIDPASGEVLVAKNALIDERDADVIEGAGVATVKIRSPLTCEADEGVCAKCYGRDL
ARGTLVNKGEAVGIIAAQSIGEPGTQLTMRTFHIGGIAQGGSQSFQETNAAGRIELRNIQ
TIENAAGELIVTGRSMQIAIIDENNVERAVFKPGYGSKLFVKDGEQVERGAKLFEWDPYT
LPIIAETNGKTRFVDLIAGLSVRDETDDATGMTQKIVTDWRSVPKGGDLKPEVILMDPET
GDPVRNEHGNPVTYPMSVDAILSIEDGQDILIGDVVARIPREGAKTKDITGGLPRVAELF
EARRPKDHAIICELDGYVRFAKDYKNKRRIRIEPADDTLEAAEYLVPKGKHIPVQEGDFV
QRGDYIMDGNPAPHDILRILGIEALANYLIDEVQDVYRLQGVKINDKHIEVIVRQMLQKW
EILDSGETTLLKGEHVDKIEFEEANAKAMSHGMEPARGEPILLGITKASLQTRSFISAAS
FQETTRVLTEASVQGKRDHLVGLKENVIVGRLIPAGTGGVVNQVRNIAGERDRKVLEARR
AEAEAAAALAAPEPVERSEADIVFGKRDD
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaacttaccacaaacccgttcaacccgctggcccaaaccaagacctttgac
cagatcagggtgtccttggcttcgccagagcgtattctgagctggtcctacggcgagatc
aagaagcctgaaaccatcaactaccggacgttcaagccagaacgtgacgggttgttctgt
gcgcgtattttcgggccgatcaaggactacgaatgcctgtgcggcaaatacaagcgcatg
aaataccgcggcgttgtctgcgaaaaatgcggtgtggaagtcacgctgcaaaaagtgcgc
cgcgaacgcatgggtcatatcgaactggctgcacctgtcgcgcatatctggtttctgaaa
tcgcttccgtcacggatcggcctgatgctggacatgacgctgcgcgatctggaacgcatt
ctgtatttcgaaaactatgtcgttatcgaaccgggcctgaccgatctgtcctatggccag
ttgatgaccgaagaagagtttctggatgcacaggaccaatatggtgcggacgccttcacc
gccaatatcggtgccgaagccatccgcgaaatgctggccaatatcgaccttgaagatgaa
gccctgcgcctgcgcgaagagctgaaagaagccaagggcgagttgaagcccaaaaagatc
atcaagcggctgaaagtggtggagcatttcatcgaatccggcaaccgcccggaatggatg
gtgctgaccgtgctgcccgtcatcccgccagagttgcgcccgctggtgccgctggatggt
ggccggttcgcgacatcggacctgaatgacctgtatcgccgcgtcatcaaccgcaacaac
cgcctgaagcgcctgatcgaactgcgtgcacccgatatcatcgtgcgtaatgagaagcgc
atgttgcaagaagcggtcgatgcactgtttgacaatggccgccgtggccgcgtgatcacg
ggcaacaacaaacgcccgctgaagtcgctgtcggacatgctgaaaggcaagcagggccgt
ttccgccagaaccttttgggtaagcgcgtcgacttctcgggccgttcggtcattgtgacc
ggccccgaactgaaactgcaccagtgtggtctgcccaagaagatggcgttggagctgttc
aagcccttcatctattcgcggctggaggccaagggcctgtcgagcaccgtgaagcaagcc
aaaaagctggtcgagaaggaacgccctgaagtctgggatattctggatgaagtcatccgc
gaacaccccgttctgctgaaccgtgcgccgacattgcaccgtctgggcattcaggcgttt
gaaccgatcctgatcgaaggcaaggcaatccagctgcacccgctggtttgttccgcgttc
aacgccgattttgacggcgaccagatggcggtgcatgtgccgctgtcgctggaagcgcag
cttgaagcccgcgttctgatgatgtcgacgaacaacgttctgtcgcctgccaacggcgcg
ccgatcatcgttccgtcgcaggatatggttttggggctgtattatgtctcgatgatgcgc
gaaggcatgaagggcgaggggatgatcttctcctcaatcgaggaagtggaacatgcgatt
gcggcagatgaagttcatctgcatgccaagattcagtgccgcgtcatgcagatcgacgaa
gatggcaacgaagtctcgcgccggtatgaaaccacaccgggccgtttgcggctgggtgcg
ctgctgccgctgaatgcgaaagcgccgtttgaactggtgaaccgcctgttgcggaaaaaa
gacgttcagaacgtcatcgacaatgtctaccgctattgcggccagaaagagtcagtcatt
ttctgtgaccagatcatgtcgcttggtttccgcgaagcgttccgcgccggtatttccttc
ggcaaggatgacatgctgatcccggaaaccaaatggacgctggtgaatgaaacccgcgat
caggttggcagtttcgagcagcaatatctggacgggctgatcacgcagggcgaaaaatac
aacaaagtcgtcgatgcatggtcgaaatgttcggacgctgtcgcgaatgagatgatggcc
gaaatctcggccgtgcttcgcgatgcggaagggcgcgaactggaaccgaattcggtttac
atgatgtcccattccggggcgcgtggctcgcccgcccagatgaaacagctgggcgggatg
cgcggtctgatggccaaaccttcgggcgagatcatcgagacgccgatcatctcgaacttc
aaagaaggtctgaccgtgttggagtatttcaactccacccacggggcgcgtaagggtctg
gccgatacggcgttgaaaaccgcgaactccggttatctgacccgtcgtctggttgacgtg
gcgcaggattgcattgtgcgcagtgacgattgcggcaccgagttgttcatcacggcgcag
gctgcggtgaatgatggtgaagttgtctcgtccttggccgagcgcgttctgggccgtgtc
gcggcagaggatgttattgatcctgcatccggcgaagttctggttgccaagaatgccctg
atcgacgaacgcgatgcggacgtgatcgaaggggcaggtgttgccaccgtcaaaatccgc
tcgcccttgacctgtgaagcggacgaaggcgtttgtgccaaatgctacgggcgcgatctt
gctcgcggtacattggtgaacaaaggcgaggccgtgggcatcatcgcggcgcaatccatc
ggcgagccgggcacgcagctgaccatgcggaccttccatatcgggggtatcgcacagggt
ggcagccagtccttccaggaaacaaacgcggctggccggatcgaattgcgcaacatccag
accatcgaaaacgccgcgggcgagttgattgtcacggggcggtccatgcagatcgccatc
attgacgaaaacaacgtcgagcgtgcggtgttcaagccgggctacggttccaaactgttc
gtcaaggatggcgagcaggtggagcgtggcgcaaaactgttcgaatgggacccctacacc
ctgccgatcattgcggaaaccaacggcaagacccgcttcgtcgacctgattgcaggcttg
tcggtgcgtgacgaaaccgatgacgcaaccggcatgacccagaagattgtgacggactgg
cggtcggtgccgaaaggtggcgatctgaagcctgaagtcattctgatggaccccgaaacc
ggcgatcccgtgcgcaatgaacatggcaatccggtgacctatccgatgtcggttgacgcc
attttgtccatcgaagacgggcaggacattctgatcggtgacgttgttgcgcgtatcccg
cgtgaaggcgcaaaaacaaaggacattaccggtggtctgccgcgtgtggccgaactgttt
gaagcgcgtcgtcccaaggaccatgcgatcatctgtgaacttgacgggtatgtgcgcttt
gccaaggactacaagaacaagcgtcgcatccgcattgaacccgctgatgacacgctggaa
gcggcggaatatcttgtccccaaaggcaagcacattccggtgcaggaaggcgactttgtc
cagcgcggtgattacatcatggatggcaaccctgccccccatgacattctgcgcattctg
ggcatcgaggctttggcaaactacctgatcgacgaagtgcaggacgtgtatcgcctgcaa
ggcgtgaagatcaacgacaagcatatcgaggtgatcgtgcggcagatgctgcaaaaatgg
gagatccttgacagtggcgaaaccacgctgctgaaaggcgagcatgtcgacaagatcgag
tttgaagaagccaatgccaaggccatgtcgcacgggatggaaccggccaggggcgagccg
atcttgctgggcatcaccaaagccagcttgcagacgcgcagcttcatttcggcagccagt
ttccaggaaaccacccgcgtgctgaccgaagcttcggtgcagggcaagcgtgaccacctt
gttggcctgaaggaaaacgtgattgttggccgccttatcccggcgggcaccggtggcgtt
gtcaatcaggtgcgcaacattgccggcgagcgtgaccgcaaggttctggaagcccgccgc
gccgaagcagaggcagccgccgccctggccgcccctgaacctgtggagcgttcggaagcg
gacattgttttcggaaaacgcgacgactga
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integrated database retrieval system
