Roseinatronobacter sp. S2: P8S53_04375
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Entry
P8S53_04375 CDS
T09279
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbae
Roseinatronobacter sp. S2
Pathway
pbae03410
Base excision repair
pbae03430
Mismatch repair
pbae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P8S53_04375 (recJ)
03430 Mismatch repair
P8S53_04375 (recJ)
03440 Homologous recombination
P8S53_04375 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbae03400
]
P8S53_04375 (recJ)
DNA repair and recombination proteins [BR:
pbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
P8S53_04375 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
P8S53_04375 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P8S53_04375 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WFE75655
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Position
940602..942368
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AA seq
588 aa
AA seq
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MSDAPLFLGVGHSATGRRWVGPDAASDRLAETIAQGSSLPRAVCAVLARAGVMPDQAEGY
LMPTLREHLPDPRTLLDMEPAAARFLQAVARRERIAIFADYDVDGGASAALLICWLRDMG
CRATLYIPDRIDEGYGPNEPAMAALADTHELIICVDCGTLSHGPIAAAKGADVIVLDHHL
GGETLPDAVAVVNPNRQDETTDLGHLCAAAVVFLMLVECNRQLREGGKTGPDLMGMLDLV
ALATVADVAPLIGVNRAFVRQGLRVMAERKRVGLRALADIARLDTAPKAYHLGFVLGPRV
NAGGRIGAADLGARLLATDDPHEASALAEKLETLNAERREIEAHVRLEALAQAQARGLDG
PLVWAAAEGWHPGVIGIAAARLKEATDRPAIVIALEGDLGKGSGRSVPGVDLGAAIQRLA
HEGLLIKGGGHKMAAGLTVARAQMEDAMARLGDLLARQGAADRPAAGLKLDGMLMPGAVT
PELIDQLDRAGPFGASMRAPRFAFADMAVRSTRPMGESHLRLRFGGDHGPTLDAVAFRAF
ETDLGSFLMTSQGRRIHLAGQIEINHWGGRQTPQLRLEDAAAPDAGPE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgcgccgctatttctgggtgtcgggcattccgcgacagggcgacggtgggtc
ggccctgatgcggcatcggaccggctggccgaaaccatcgcccaaggcagttcgctgccg
cgtgcggtatgtgcggtgcttgcgcgcgccggtgttatgcccgatcaggccgaaggctac
cttatgccgacactgcgcgagcatttgccggacccgcgcaccctgctggacatggaacct
gccgctgcacgttttttgcaggccgttgcgcggcgtgaacgcattgccatttttgccgat
tacgatgttgatggtggcgcatcagcggcactgctgatctgctggctgcgcgatatgggg
tgccgtgccaccttgtatatccccgaccgcattgacgaaggttatgggccgaatgaaccc
gctatggccgcgctggcagacacgcatgagctgattatctgtgttgattgtggcaccctt
agccatggccctatcgcggctgcgaaaggtgctgatgttattgtgctggaccaccatctg
gggggtgaaaccctgccggatgcagtggcggtcgtgaaccccaaccggcaggatgaaacc
accgatctgggccatctatgtgcggccgccgtggtgtttctgatgctggtcgagtgcaac
cgccaactgcgcgaggggggcaagaccggcccggacctgatgggaatgctggatctggtc
gcgctggcaacggtggcggatgttgcgcccttgattggtgtaaaccgcgccttcgtgcgg
caggggttgcgtgtcatggccgaacgcaagcgcgtcgggctgcgggcgttggcggatatc
gcgcggctggataccgccccaaaggcctatcatttgggctttgttctggggccgcgcgtg
aatgcgggcgggcggattggtgcggccgatctgggcgcaagacttctggccacggatgac
ccgcatgaggccagcgcactggccgagaagctggaaaccctgaatgccgaacggcgcgag
atcgaagcgcatgtgcgccttgaggcccttgcgcaggcacaagcgcgcggtctggacgga
ccacttgtctgggccgccgcagaaggctggcacccgggcgtcatagggattgccgcagcg
cgcctgaaagaagccacagaccgccccgcgattgtaattgcgctggaaggggaccttggc
aaagggtccggccggtccgtgcccggggtcgatctgggggcggcaatccagcggcttgcg
catgaggggctgttgatcaagggcggcgggcataaaatggccgctggcctgacggtggcg
cgcgcgcagatggaagacgcgatggcgcgcctgggcgatctgctggcgcgacagggtgcc
gcagacaggccggcggccggtctgaagctggatggcatgctgatgccaggggcggtcaca
cccgaactgattgaccagcttgacagggcagggccgtttggtgccagcatgcgcgcgccg
cgtttcgcctttgccgatatggctgtccggtccacgcgccccatgggcgaatcgcatttg
cggctgcgctttggcggcgatcatggcccgacactggatgctgtggcatttcgtgcgttt
gaaacggaccttgggtcctttctcatgacatcccaagggcgcaggatacacttggcgggg
caaatcgagatcaaccactggggcgggcgtcagaccccgcaactgcgactggaggacgct
gccgcacccgatgcagggccggaatga
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