Roseinatronobacter sp. S2: P8S53_17330
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Entry
P8S53_17330 CDS
T09279
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pbae
Roseinatronobacter sp. S2
Pathway
pbae00630
Glyoxylate and dicarboxylate metabolism
pbae00680
Methane metabolism
pbae01100
Metabolic pathways
pbae01120
Microbial metabolism in diverse environments
pbae01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pbae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
P8S53_17330 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
P8S53_17330 (fdhF)
Enzymes [BR:
pbae01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
P8S53_17330 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_10
Fer4
Fer4_9
Fer4_8
Fer4_21
Fer4_6
Fer4_17
Fer4_2
Fer4_15
Fer4_16
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
WFE76810
LinkDB
All DBs
Position
unnamed2:105503..108400
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AA seq
965 aa
AA seq
DB search
MKDFVIPSDDRDLGTPARAGPPVTLSIDGFDVTVPEGTSVMRAAALAGLSIPKLCATDSV
EAFGSCRLCVVEIEGRRGTPASCTTPVAPGMVVRTQNEKLRKLRRGVMELYISDHPLDCL
TCAANGDCELQDMAGAVGLRDVRYQAPEGGALANHFAPRDTSGEANREYLPKDDSNPYFT
YDPAKCIVCSRCVRACEEVQGTFALTIEGRGFDSRVSFGAKSDTALASDCVSCGACVQAC
PTATLQEKSVIELGTPTRSVITTCAYCGVGCSFKAELNGDQLVRMVPYKHGKANRGHSCV
KGRFAYGYSNHKDRILNPMIRDSIDQPWREVSWDDALSFAATKMRGIQAQYGRKSVGVIT
SSRCTNEETYLVQKLTRAVFGNNNTDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVEQAD
VIMVIGANPHAGHPVFASRMKKRLRAGAKLIVVDPRRTETVQGPHYKAAHHLALRPGTNV
AVITAMAHVIVTEGLMDENFIRTRCDWDEFQHYAEFASDPRHSPEATALLTGVPADELRA
AARLFATGGNGAVYYGLGVTEHSQGSTTVMAIANLAMLTGNVGRRGVGVNPLRGQNNVQG
SCDMGSFPHELPGYRHVKLPEVRAIFESAWGVKIDPEPGLRIPNMLDAAVSGTFKGLYCQ
GEDILQSDPDTKHVAAGLAAMECVIVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERR
INRVRQVMAPRNGYADWEVTQLLANAMGANWRYTHPAQIMDEIAMTTPSFAGVDYATLEE
KGSVQWPCNEANPEGTPLMHVDGFVRGKGRFIVTEYVATDEKTGPRFPLLLTTGRILSQY
NVGAQTRRTDNVVWHDEDLLEIHPHDAEQRGIKQGDWVKLASRSGETTLRATLTDRVSPG
VVYTTFHHPETQANVITTDYSDWATNCPEYKVTAVQISPSNGPTQWQEDYQAQAALARRI
LPAAE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattttgtcattccatctgatgaccgcgatctgggcacacctgcgcgggctggc
ccgccggtaacactgtcgattgacgggtttgatgtgactgtgcctgaaggcacatccgtg
atgcgggccgccgcgctggcggggttgtccatcccgaaactatgcgcgaccgacagcgtc
gaggcgttcgggtcttgccgcctgtgcgtggtcgagatcgaagggcggcgtggcacgcct
gcatcgtgcacgacacccgttgcgccgggcatggttgtgcgcacccagaatgaaaagctg
cgcaaactgcgccgcggcgtgatggagctgtatatcagcgaccacccgctggattgcctg
acttgtgcggccaatggcgattgcgaattgcaggatatggcgggcgctgtgggcctgcgc
gatgtgcgctatcaggcgcccgaggggggcgcgctggccaatcattttgcgccgcgtgat
acaagtggcgaggccaatcgcgaatacctgccgaaagatgacagcaacccgtatttcacc
tatgaccctgcgaaatgcattgtgtgttcgcgctgcgtgcgcgcctgcgaagaagtgcag
ggcaccttcgcgctgacgatcgaggggcgcgggtttgacagccgtgtgtcttttggtgcg
aaatccgacacggcactggcgtcggattgcgtgtcctgcggggcttgcgtccaagcctgc
ccgacggccacattgcaggaaaaatccgtgatcgagttgggcacgcccacgcggtctgtt
atcacgacctgcgcatattgcggggtgggctgttcgttcaaggccgaactgaacggcgac
cagttggtgcgcatggtgccctataagcacggcaaggccaatcgcggccatagctgcgtg
aaggggcggtttgcctatggctattccaaccataaagaccgcatcctgaacccgatgatc
cgcgacagcatcgaccagccctggcgagaggtcagctgggacgacgcgctgtccttcgcc
gccacaaaaatgcgcggcattcaggcgcaatacgggcgcaaatcggtgggggtgatcaca
tccagccgctgcaccaatgaagaaacctacctggtgcagaaactgacccgcgcggtgttt
ggcaacaacaacaccgacacttgcgcgcgcgtgtgccattcgcccaccggctatgggctg
ggccagacattcggcacctctgcgggcacgcaggatttcgacagtgtcgagcaggccgat
gtcatcatggtgatcggcgccaacccgcatgcgggccatccggtgtttgccagccgtatg
aaaaaacgcctgcgcgcgggcgcgaagctgattgtcgtggacccgcgccgcaccgaaacc
gtgcaaggcccgcattacaaggccgcgcatcatctggcgttgcggcccggaacgaatgtg
gccgtcatcaccgccatggcgcatgtcattgtcaccgaagggctgatggacgagaatttc
attcgcacccgctgcgattgggatgaattccagcattacgccgaattcgcgtccgacccg
cgccacagccccgaagccaccgcattgctgaccggtgtgcctgcggatgaattgcgcgcc
gctgcacggctgtttgccacgggcggcaacggggccgtttactacgggctgggcgtgaca
gaacattcccaagggtccaccactgtcatggcgattgccaatctggccatgctgaccggc
aatgtcgggcggcgcggtgtgggcgtgaaccccctgcgcggccagaacaatgtgcaggga
tcctgcgacatggggtcgttcccgcatgaactgccgggctaccgccatgtcaaactgccc
gaagtccgcgcgattttcgaatccgcatggggtgtgaaaatcgaccccgaaccggggttg
cgcattcccaacatgctggatgcggccgtgtcgggcacgttcaagggcctgtattgtcag
ggcgaggatattctgcaatcggaccccgacaccaaacatgtggcggcgggactggcggcg
atggaatgtgtgatcgtgcatgacctgttcctgaatgaaaccgccaattacgcgcatgtg
ttcctgccggggtccacatttctggaaaaggacggaacattcaccaatgccgaacggcgc
ataaaccgtgtgcgtcaggtgatggccccgcgcaacggctatgccgattgggaagtgacg
cagcttctggccaatgcgatgggcgcgaactggcgctatacccatcccgcccagatcatg
gatgaaattgccatgaccacccccagtttcgccggtgtggattatgccacgctggaagaa
aaagggtcggtgcaatggccctgcaatgaagcaaaccccgagggcacgccgctgatgcat
gtcgacgggtttgtgcgcggcaagggtcggttcattgtcaccgaatatgtggccacggac
gaaaagaccgggccgcgcttcccgctgctgctgaccactgggcgcattctgtcgcaatat
aacgtgggcgcccagacgcggcgcaccgataacgtggtctggcatgatgaggatctgctg
gaaatccacccccatgatgcggaacagcgcggcatcaagcagggcgattgggtgaaactg
gccagccggtcgggcgaaaccacgctgcgcgccacattgaccgaccgtgtcagcccgggt
gtggtttacaccaccttccaccaccctgaaacgcaggcgaatgtcatcaccaccgattat
tcagactgggccaccaattgccccgaatacaaggtgacggcggtgcagatcagcccgtcg
aatggcccgacccaatggcaggaagactatcaggcgcaggccgcactggcgcgccgtatc
ctgcccgcggcggagtag
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