Svornostia abyssi: LRS13_01070
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Entry
LRS13_01070 CDS
T09859
Name
(GenBank) SDR family oxidoreductase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj00521
Streptomycin biosynthesis
pbaj00523
Polyketide sugar unit biosynthesis
pbaj00525
Acarbose and validamycin biosynthesis
pbaj00541
Biosynthesis of various nucleotide sugars
pbaj01055
Biosynthesis of vancomycin group antibiotics
pbaj01100
Metabolic pathways
pbaj01110
Biosynthesis of secondary metabolites
pbaj01250
Biosynthesis of nucleotide sugars
Module
pbaj_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LRS13_01070
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LRS13_01070
01055 Biosynthesis of vancomycin group antibiotics
LRS13_01070
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LRS13_01070
00525 Acarbose and validamycin biosynthesis
LRS13_01070
Enzymes [BR:
pbaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LRS13_01070
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
UUY04149
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Position
complement(212158..213093)
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AA seq
311 aa
AA seq
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MSPAAPGFLGSHMCEELLRRGHRVICVDNFETGSLRNIAHIRQPEFTLMNVDIIEPYFVD
EPVDFVYHLASPASPIDYLRLPLHTLKVGSYGTHHTLGLAKQHRARFLLASTSEVYGDPQ
VHPQPETYWGHVNPIGPRGVYDEAKRYAEALTMAYHTQQGVDTSMVRIFNTYGPRMRPHD
GRAIPTFLRQALQDRPITVFGEGKQTRSFCYVDDLIRGIIGLAESGYHEPVNIGNPDEFT
LLELAETVVEVTGSRSEIVFEALPTDDPQVRQPDITRAKDLLGWQPEVVLRDGLQKTIEL
AGVEGLVGARR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaccggcggcgccgggcttcctgggctcgcacatgtgcgaggaactgctgcgccgc
ggtcatcgggtgatctgtgtcgacaacttcgagacggggtcgctgcgcaacatcgcgcac
atccgtcagccggagttcacgctgatgaacgtcgacatcatcgagccgtacttcgtcgac
gagccggtcgatttcgtctaccacctggcgtcgccggcgtcgccgatcgactacctacgc
ctgccgctgcacacgctgaaggtcggctcgtacggcacgcatcacacgctgggcctcgcc
aagcagcatcgtgcgcggttcctgctggcgtccacgagcgaggtctacggcgacccgcag
gtccacccgcagcccgagacctactgggggcacgtcaacccgatcggcccgcgcggcgtc
tacgacgaggccaagcggtacgccgaggcgctcacgatggcctaccacacgcagcagggc
gtcgacacgtcgatggtgcggatcttcaacacgtacgggccgcggatgcgcccgcacgac
ggccgcgcgatcccgacgttcctgcgtcaggcgctgcaggaccggccgatcacggtgttc
ggcgagggcaagcagacgcggtcgttctgttacgtcgacgacctgatccgcgggatcatc
gggctggccgagagcggctaccacgagccggtgaacatcggcaatcccgacgagttcacg
ctgctggagctggccgagacggtggtcgaagtcacggggtcgcggtcggagatcgtcttc
gaggcgctgcccaccgacgatccgcaggtccgccagcccgacatcacccgggccaaggac
ctgctcggctggcagccggaggtcgtgctgcgtgacgggctgcagaagaccatcgagctc
gccggtgtcgagggcctcgtaggagcgcgtcgctga
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