Svornostia abyssi: LRS13_01850
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Entry
LRS13_01850 CDS
T09859
Name
(GenBank) DUF6531 domain-containing protein
Organism
pbaj
Svornostia abyssi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
DUF6443
DUF4258
TBP-TOTE
Motif
Other DBs
NCBI-ProteinID:
UUY04300
LinkDB
All DBs
Position
complement(376131..383387)
Genome browser
AA seq
2418 aa
AA seq
DB search
MSLFCGLAQRYLAMVLGCVVVLAVPAVAGAAGPLAGPGLALPGQGPAAPVVPELSPEGQE
RSEVAVREAVEQRREELASPVKRAERVESRRRYEGLRGRAAFDVGKRFFDILARPSWRPA
DAQPGVSPLKYLDARTMLVRDGAESRKALLVSDVPLWTEDEEGDLARVSTKLVDRGASLV
TENAFVDVAISRDADAGVEFVGQSASLVPVVAEGAVVNTVSSVDRVTYTNIGADTDLSIS
PTAAGVQTHHVLRSVDAPQSLAMRFDLPDGAQMAPQDGGGASITKDGEALGSISAPIAVD
AQGQAVQSSLRLDGETVVVDVEHHGKDLAYPIVVDPNYVLDTNPWYDVTLQAGPWRFGTP
WPGYFFLGQTGDGAKYLYSAANANFGHTTWGWMTNLVPGGGFTYATQFYNLSHSPQNTCI
TAGVFNHGASAWDGDGYHHAHGVGAGTGPMVQCGAFSGWVVDVCADGNCWGGVPGETAAL
QLWMYGTAFRGPNASAAVSATSAYLRDNDAPYWVDLGDHPNNGEWSNAETARIAASARDN
GLGMKRTYFKFGDTPERGTSSGCNGTWNAACPPELPWSEVVSLPQGEHKVEYGALDILDN
PIPTPTSRWFRIDRGVPSVKFGGSLAGRSGTTETAREVRAVAEKTRLTIDVTDEVAGSNK
AGPNARSGVSTVTFALARKNAQGGWDAVPDSALPTNHNTGSCPAGSCAMPRKEYMLDPSV
RTPGAYRLTVIASDYAGNSVTREQHFKVASGRLTTVVEGQRSSRYVTLKAQPPAGQTDAT
FEYRSSATTESMWTALPAGASKQGPLDPVAGWPVSASKTLVWDVARTYTGYLVDENGERT
LGNSVPAIEPFKPFEVRARFPDGTTTDELRLEYDPSGDGTGNDRESVGPGIVDLQTGAFA
LSEEDVSVEAFLTDLKVSRTYNSRGRAQTGAAVGPLGPGWSLGAPSIEGSEYQKVVYEPP
VSENFTYDDDSGDTDTLVEPGYAVVTAGDGSEMVFEQVGTDAGAFVSEPGLESLSLKRLE
GTAEAPDKFELTDHDSQERFVFNANGTPKTFEIETVRSLGDNAKELKYLWELSGGKRVLR
RVASPAAPGVSGADCGTTSFAQTPPAGCRWLNFYYSGGLLTDIKFVAYQSATTLAPERRL
VTYGYNANGRLTSVLDEANLSTTYTYEDLPAGGSYSAATVLKTIDPPGAEKPWTVNYQRV
DTDKDQGRVRNVQRGTSPASGTATTTVEYEVPRAPADGGPWDMRPSILGLLGQTDVPIDG
TAIFPADVTDLNDRTKASISYLNGQGRTVNKVAPGTDPAQPRVSTTEYDKYGNAVRELTP
ENRRTAQAAADPAAKAKDLSTERAFENTEVGTRMVWELGPRQEVRISGQTGTVQGRRHTA
VTYDEERPVGNTTDYNFATTTRVSALTGTPDYGQLATMGANDFDQRVTKQKHDYDKRVMV
ESIVDPAGLNLRTTTQYDGSDGLRYGGQGLVTEERTPRKPGGGDASARTTTYYTVDDTAP
GTACDYQPQWAGFVCQHAPAAQPGTTGLPNLPVTTYEYNTLGSVSKETETITGTQAATRT
TTTTFDAYGRPEKVTTTATGTGAGTAVADLETVYDPNTGRPTISRSKDGTTTRQVTKTFD
DLGRMTSYTDADGLTTTTTFDILDRPTQVTDPKQGTRTVTYEPRTGDVVGVTDPALGNAP
DQPSLRGEYDLDGRLVTQTFTKANIRLDIGYDAAGTPTSRQYRKAVGCATNCERSASQVK
ETIHGQWLEHTTSRQGQSPSTERFSYDQAGRLTKAEDMLGTQCTTRAYEFAGERGMNSNR
TKTATYAPQANGDCQATTGTETVLNHDIADRITDSGFVYDPFGRITAVPAQHAGGAPLQA
KYFINDLAQEITQAGKKTEIELDPADRVRKRTVSGTEAYVEISHYDADGDEPAFTERGTD
VFREIDGLDGDLAATSSPQNGTVLQLTDLHGDVIGEAANDPAATALTGARSQDEFGVPGP
TSDGTPQTITRVGTSKAASTTNVTSLAIAKPAGVQAGDLLLAGLSVSSGSTITPPSGWAP
VAGAEVATGSSKWQLFAKRASATESTPYTFTTSSSGKHAAGITALRNTADQAPLGPIASS
IGYGTNITAPSVTPTVDGAAIELLVGSNTGDNNGGEAWSVASPLQLDWSTATGASASGNR
NAAMALRILTGGKNQPTGTFTVTNLTGNNNNVSNVAITAAVKPKTTGGPTAPQYGYLGGK
QRYTTTSTGVIEMGARIYVPQLGRFLQPDPVYGGSANAYDYAGQDPVNTVDLDGRQIRKA
PGGWWSRHFHSIGNGGRRPVMRHNVKANSSVTRRMKVGKNSKSRDWEISLRTTKHVRKRM
AQRNFTMREIKRIMRTGDMYYDFQEKTFAFVKGGNQVAYNPKNGRIVTVLRERRADEFLP
GPNNYYRGGQRFVKVTGQ
NT seq
7257 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttttttgcgggcttgcgcagcggtacctcgcgatggtgctcggttgcgtcgtt
gtactggccgttcccgcggtcgcgggcgcagctgggccgttggcagggccggggcttgcg
ctgccgggccagggtccggctgctccggtcgtgccggagttgtcgcctgaggggcaggag
cggagtgaggttgctgttcgcgaagctgttgagcaacgtcgcgaggagcttgcgtcgccg
gtcaagcgggcggagcgtgtcgagtcgcggcgtcgctatgagggtctgcgggggcgggcg
gcgtttgatgtcgggaagcgtttcttcgacattcttgctcgtccgtcgtggcgtccggcc
gatgcgcagccgggcgtctcgcccctgaagtacctggacgcgcgcacgatgcttgtgcgt
gacggggcggagagtcgcaaggcgctgttggtctcggacgttccgttgtggacggaggat
gaggagggcgatcttgcgcgggtgagcacgaagttggtggaccgtggcgcctcgctggtg
acggagaacgcgttcgtcgatgtggcgatctccagggacgcagacgcgggcgtcgagttt
gtggggcagtcggcgtcgttggtgccggtggtggctgagggtgcggtggtcaacacggtc
agctcggtcgatcgggtgacgtacacgaacatcggtgcggacacggatctgtcgatctcc
ccgacggcggcgggtgttcagacccatcatgtgttgcgcagcgtcgatgcgccacagagt
ttggcgatgcggttcgatctgcctgatggtgcgcagatggcgccccaggatggcggtggc
gcgtcgatcaccaaggatggcgaggcgttggggtcgatcagcgcgccgatcgccgtcgac
gcgcagggccaggctgtgcagtccagcctgcgcctcgatggcgagacggtggtggtcgat
gtcgagcatcacggcaaggacttggcgtacccgattgtcgtcgacccgaattacgtgttg
gacacgaacccgtggtacgacgtcacccttcaggccggtccgtggcggttcggcacgccg
tggcccggctacttcttcctgggccagactggtgacggcgcgaagtatctgtactcggcg
gcgaacgcaaacttcggccacacgacgtggggttggatgacgaacttggtcccgggtggc
gggttcacgtacgcgacgcagttctacaacctgtcgcacagcccgcagaacacgtgcatc
acggcgggtgtcttcaaccacggcgcgagcgcctgggacggtgacggttaccaccacgcg
cacggcgtcggtgccggtacgggtccgatggtgcagtgcggcgcgttctccggttgggtc
gtcgacgtgtgcgccgatggcaactgctggggcggggtgccgggtgagaccgcagcgctg
cagctgtggatgtacgggaccgcgttccgcggcccgaacgccagcgcggcggtcagcgcg
acgtcggcgtacctgcgcgacaacgacgccccgtactgggtcgatctcggtgaccatccg
aacaacggtgagtggtccaacgccgagacggcgcggatagcggccagcgcccgtgacaac
ggccttggaatgaaacgcacgtacttcaagttcggcgacacgcccgagcgggggacatcg
tcggggtgcaacgggacgtggaacgcggcctgcccgcctgagttgccctggagtgaggtc
gtgtcgctgccccagggtgagcacaaggtggagtacggcgcactcgacatcctcgacaac
ccgattccgactccgacgtcccggtggttcaggatcgatcggggcgtcccgtcggtcaag
ttcggcggatcgctggccggccggtcgggcacgactgagaccgctagggaggttcgcgca
gtcgcggagaagacacgcttgacgatcgatgtgaccgacgaggtcgccgggtccaacaag
gccggtccgaatgcgcgttcgggagtgagcaccgtcaccttcgcgctggcccgcaagaac
gcgcagggcggctgggacgccgttccggattccgcgctgccgaccaaccacaacactggc
tcctgtccggctggctcctgcgccatgccgcgcaaggagtacatgctcgacccctcggtc
cgcacgccgggcgcctaccgtctgaccgttatcgcctcggactacgcgggcaacagcgtg
acccgggagcagcacttcaaggtcgctagtggccgcctcacgacggttgtcgagggtcag
cgcagcagccggtacgtgaccctgaaggcacagccgcccgcgggtcagactgacgcgacg
ttcgagtaccgctcgtctgcgaccaccgagtcgatgtggactgcgctccctgccggcgcg
tcgaagcaggggccgctcgatcctgtcgccggatggcctgtttcggcatccaagacgctc
gtctgggacgtcgcgcgaacgtacaccgggtacctggtcgacgagaacggcgagcgcacg
ctggggaacagcgtgccagccatcgagccattcaagccgttcgaggtccgtgcccgcttc
cccgacggaacgaccaccgacgaactgcggctggagtacgacccgtccggggatggaacg
ggtaatgatcgcgagagcgtcggcccaggcattgtggacctgcagaccggcgccttcgcg
ctctcggaggaggacgtgtcggttgaggcgttcctgacagatctgaaggtctcgcgtacg
tacaactcgcgcggtcgggcgcagaccggcgcggcggtcgggccgctcggtcccggctgg
tcgctgggagcgccgtcgatcgaggggtcggaataccagaaggtcgtctacgagccgccc
gtgagcgagaacttcacctacgacgacgacagcggcgacacggacacgcttgtcgagccc
ggctacgcggtcgtgaccgctggtgatggcagcgagatggtgtttgagcaggtaggcacc
gacgccggagcgttcgtctccgagccggggttggagagcctgtcgctgaagcggctggag
ggcaccgccgaagcccccgacaagttcgagctgactgatcacgattcgcaggagcgtttc
gtcttcaacgcaaacggcacgccgaagacgttcgagatcgaaacggtccgctcactcggc
gacaacgccaaggagctgaagtacctgtgggaactcagcggcggcaagcgcgtcctgcgc
cgcgttgcgtcgcctgcggcgccgggggtcagcggagcagattgcgggacgacgagcttc
gcgcaaacgccgccggctgggtgtcgctggctgaacttctactacagcggcgggctgctg
acggacatcaagttcgtcgcctatcagagcgcgacgacgctggcgccggagcggcggctg
gtcacctacggctacaacgccaacgggcggctgacgtcggtcctcgacgaggcgaacctc
agcacgacctacacgtacgaggacctcccggcgggcgggagctactcggccgcgacggtc
ctgaagacgatcgacccgccgggtgccgagaagccgtggacggtgaactaccagcgcgtc
gataccgacaaggaccagggtcgtgtacgcaacgtccagcgcggcacctctccggcgtcg
gggacggcgacgacgacggtcgagtacgaggttccacgggctccggctgacggcgggccg
tgggacatgcgcccatcgatcctgggtctgctcggtcagactgatgtgccgatcgatggc
accgcgatcttccccgccgacgtcacagatctgaacgaccgcaccaaggcgtcgatcagc
tacctcaacgggcagggccggacggttaacaaggtcgcgccgggcaccgaccctgcccag
ccgcgggtgtcgacgaccgagtacgacaagtacggcaacgcggtccgcgagctgacgccc
gagaaccgcaggacggcgcaggccgccgctgatcctgccgcgaaggcgaaggatctcagt
accgagcgggcgtttgagaacaccgaggtcggcactcggatggtgtgggaactcggcccg
cgccaggaggtccgcatctccggccagaccggcaccgtccaaggccgcaggcacaccgcg
gtcacctacgacgaagagcggcccgtggggaacaccacggactacaacttcgcgacgacc
acccgtgtctccgcgctcaccggcaccccggactacgggcagctggcgaccatgggcgcc
aacgacttcgaccagcgcgtcaccaaacagaagcacgactacgacaagcgcgtcatggtc
gagagcatcgtcgacccggcggggctaaacctacgcaccaccacccagtacgacgggtcg
gacggcttgcggtacggcggccaaggcctggtcaccgaggagcgtacgccgcgtaagcct
ggtggcggggacgcgtccgcgcggacgacgacgtactacaccgtggacgacaccgcgccc
ggcacggcgtgcgactaccagccgcagtgggcgggcttcgtctgccagcacgcccccgcc
gcccaaccgggcaccaccggtctgccgaatctgcccgtgacgacgtacgagtacaacacc
ctcggctcggtctcaaaggagacggagacgatcacgggcacgcaggccgcgacgcggacc
acgacgacgaccttcgacgcatacggcaggcccgagaaggtcaccaccacggctaccggc
accggcgccggtaccgcggtcgcggacctcgagacggtgtacgacccgaacaccggccgt
ccgaccatcagccgctccaaggacggcacgaccacccgacaggtcaccaagacgttcgac
gacctcggccggatgacgtcctacaccgacgccgacgggctaacaacaaccaccacgttc
gacatcctggaccggcccacgcaggtcaccgaccccaaacagggcaccagaaccgtcacc
tacgagccccggaccggtgatgtcgtcggtgtgaccgacccagcgctcggcaacgcgccc
gatcagccatccctgcgcggcgagtacgacctcgacggacggctcgtcacccagaccttc
accaaggccaacatccgtctggacatcggctacgacgcagccggcaccccgacgagccgt
cagtaccgcaaagccgtcggctgtgcgacgaactgcgaacgcagcgcctcccaggtcaag
gagacgatccacggccagtggctggagcacacgaccagccgccagggacagagcccgtcc
accgagcggttcagctacgaccaggccggacggctgaccaaggccgaggacatgctcggc
acgcagtgcaccacgcgcgcctacgagttcgccggtgagcgcggcatgaacagcaaccgc
accaagaccgcgacgtacgcgccgcaggccaacggcgactgccaggcgaccaccggcacg
gagaccgtgctcaaccacgacatcgccgacaggatcaccgacagtggctttgtctacgac
ccgttcgggcggatcactgcggtccccgcccagcacgctggtggcgcgccgctgcaggcc
aagtacttcatcaacgacctcgcgcaggagatcacgcaggccgggaagaagacggagatc
gagcttgatcctgccgatcgggtccgcaagcgcaccgtcagtggcaccgaggcgtacgtt
gagatctcgcactacgacgccgatggcgacgagcccgcgttcactgagcgcggcaccgac
gtgttccgcgagatcgacggcctggacggcgacctggccgccaccagcagcccgcagaac
ggcacagtgctgcagctcaccgacctgcacggcgacgtcatcggcgaggccgcgaacgac
cccgcagccaccgcgctgacaggcgcccgatcgcaggacgagttcggcgtccccggcccg
accagcgacggcacgccgcagacgatcacccgcgtcgggacgagcaaggcggcgagcacc
acgaacgtcacgtcgctggcgatcgccaagcccgccggcgtccaggccggggacctgctg
ctcgccggcctgtctgtcagcagcggctcgacgatcaccccgccctcgggatgggcgccg
gtcgccggcgccgaggtcgcaacgggctcgtcgaagtggcagctgttcgccaagcgcgcc
agcgccaccgagagcacgccgtacacgttcaccacgtcgtcgagcggcaaacacgccgcc
gggatcaccgccctgcgcaacaccgccgaccaagcgccgctcggcccgatcgccagcagc
atcggctacgggacgaacatcaccgccccatcggtaaccccgaccgtcgacggcgccgcg
atcgagctactcgtcggctcgaacaccggcgacaacaacggcggcgaagcatggtcggtc
gccagcccactgcaactggactggagcaccgccaccggcgcgagcgccagcggcaaccgc
aacgccgcaatggcactgcgcatcctgaccggcggcaagaaccagccgaccggcacgttc
accgtcaccaacctcaccggcaacaacaacaacgtctccaacgtcgcgatcaccgccgca
gtcaagcccaagaccaccggcggcccaaccgccccgcagtacggatacctcggcggcaag
cagcgctacaccaccaccagcaccggcgtcatcgaaatgggcgcccgcatctacgtccca
caactcggacggttcctgcagcccgaccccgtctacggcggatccgccaacgcctacgac
tacgccggccaagacccggtcaatacagtggatctggatgggcgccagattcgcaaggcg
cccggtggttggtggagtcggcacttccacagcatcgggaacggcggccgacgcccggta
atgcgccacaacgtcaaggcgaacagcagcgttacgcgacgcatgaaggtcgggaagaac
tcgaagtcgcgcgactgggaaatcagcctacgaacgacgaaacatgtcagaaagcgaatg
gctcaacgcaacttcaccatgcgtgagatcaagcgcatcatgcggaccggtgacatgtac
tacgacttccaagagaagacgttcgcattcgtgaagggcgggaaccaggtcgcctacaac
cccaagaacggtcggatcgttacagtccttagggagcgcagggcagatgagttcttgcca
ggtcccaacaactactacaggggcggccagaggtttgtaaaggtgactgggcaatga
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