Svornostia abyssi: LRS13_02025
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Entry
LRS13_02025 CDS
T09859
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pbaj
Svornostia abyssi
Pathway
pbaj02020
Two-component system
pbaj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LRS13_02025
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRS13_02025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbaj03000
]
LRS13_02025
Transcription factors [BR:
pbaj03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
LRS13_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR_2
HTH_IclR
HTH_24
MarR
DUF5817_CT
DUF1670
Rrf2
TrmB
Motif
Other DBs
NCBI-ProteinID:
UUY04334
LinkDB
All DBs
Position
419278..419979
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AA seq
233 aa
AA seq
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MSTAEDAVQLLARVPVFETLGSDDLARVAAVAVPRRFAADQIIFREGDASDTCYIVRSGH
ARAVREHADGRTITLAHFGPGDFFGELAMFDSERRSATLESLDQLEAVAITGDDMRRLLR
EHPDISMKLVMALGRRLREANERLSRQSFQTVQSRVATVLSQLVTRARDETPTNGDEGDV
LLVITQSDIAQLAGSSRESASRFLAVLERAGVVTQGRGKITVHDPAALQRYVY
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccgaggacgcggtgcagctactggcacgggtgccggtcttcgagaccctg
gggagtgatgatctcgcccgggtcgcggcggtcgccgtcccgcgccggttcgccgccgac
cagatcatcttccgcgagggagacgccagcgacacgtgctacatcgtgcggtccggccat
gcccgcgccgtgcgcgagcacgccgacgggcgcacgatcacgctcgcccacttcggtccc
ggggacttcttcggcgagctggcgatgttcgactccgagcggcgatcggccacgctggag
tcactcgaccagctcgaggccgtcgcgatcaccggtgacgacatgcgccggctgctgcgc
gagcacccggacatctcgatgaagctcgtcatggcgctgggccgccgcctgcgtgaggcc
aacgagcgcctgtcgcgccagtccttccagaccgtgcagagccgcgtcgcgacggtgctg
agccagctcgtcacccgcgcgcgtgacgaaacgccgacgaacggcgacgaaggcgacgtc
ctgctcgtcatcacgcagtcggacatcgcccagctcgccggctcctcgcgtgagtccgcc
agccggttcctcgcggtcctcgagcgcgcgggcgtcgtgacgcagggccgcggcaagatc
acggtccacgacccggcggcgctgcagcgctacgtctactga
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