Svornostia abyssi: LRS13_02210
Help
Entry
LRS13_02210 CDS
T09859
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj03420
Nucleotide excision repair
pbaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LRS13_02210
03430 Mismatch repair
LRS13_02210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbaj03400
]
LRS13_02210
Enzymes [BR:
pbaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRS13_02210
DNA repair and recombination proteins [BR:
pbaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRS13_02210
MMR (mismatch excision repair)
Other MMR factors
LRS13_02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
AAA_19
AAA_30
AAA_22
AAA_25
NACHT
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UUY04366
LinkDB
All DBs
Position
450633..453764
Genome browser
AA seq
1043 aa
AA seq
DB search
MSAAQLRVADHPSGPLVVLGGAGTGKTTALVERVAHLADRGTPPDAVVLLTSTLACADDL
RRRLESRLTCAYEELAVHTVGSLCVRLLHDQALDAGLEPFVLPVTAADRLAMLLERVDEL
TLQEHDLGGQPAALLSGVVARIDRLKEALVTAEDYAAWSGGLSEEPDALARTAREREFAQ
LYLAHDRMLAEQSAIDEGDLLLRAVALLREHEHVREGLGGRYRHVLVDELQDLGPGAVQL
VGLLAAGNVDGPNLVVCADDDQCTQRLRNAAAKNVADVRRAHPDAPVVRLEESFRCSQRI
LDAAGAVLAQAPDRIEKTISGPQGGTVQVWRAANERAQAQNAAAEIERMVREGTPASEIA
VLVRNVRNEGQAIASALAERAVPYRVVGAATFFQRAEVRDLLAWLRLLNDPHDAGAVVRA
LSRAPIELRAADLARVIQIARRRKLDMVGALAASTESPQIPPESRERILAFLKLHRSAGA
ALDTTRPDLFVHRLIDRLGLRRQQLFAAQADVVERLRSLARFGDLAAAHVRRDPQATTRD
FARYIAAVAEAGLPQDEELDGGSPPEAVRVVGMRQAKTIEADHVFVLGLHGARMPGARRP
QYEPIPDALLREDVPDDTRANHVGEMRRLLALAMTRARRTLVLAYPAHSERGAAQPASPF
LEDVRAALDLPEEPRAEELFGPEETLHATFQALRDTLLHDAAKVGKGLGELRLETDLDVT
HSVVRYLELVKVAALLERPTGQTVSDALPLINQRLGADLSPLQREILESSELDALLLDAE
RDDRARAAARSARPEPSLEPFLPRRGEGLALSASDIETYRMCPLKYKFARVFRIPQEPTV
NQRFGIIVHQVLERYHGTGMTSLDELLGLLDAGWRRGGMDDGEQAKQLRGKAEAALRRYW
ERQRDEGVEPVWIEKSFSFQMGPHTLRGRVDRVDRLPDGAYELIDYKTGRPRSAHQLRED
VQLSLYAIGAREAWHLEASDQAYLYVLDDEKVRVPTEEIDPDWIRDTVFEVAEGILGQGF
EPTPSFAACSMCDYRIACPAAER
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggcccagctgcgggtcgcggaccatccgagcggcccgctcgtcgtgctcggg
ggcgccgggaccgggaagacgaccgccctggtcgagcgcgtggcgcacctggccgaccgg
ggaacgccaccggacgcggtcgtcctgctcacctccacgctcgcgtgcgcggacgacctc
cggcgccggctggagtcccgtctcacctgcgcgtacgaggaactcgccgtccacaccgtg
ggcagcctgtgcgtgcggctcctgcacgatcaggccctcgatgccggcctggagccgttc
gtcctcccggtcaccgcggcggaccggctggcgatgctgctcgagcgcgtcgacgaactg
acgctccaggagcacgacctcggcggccagcccgccgcgctgctctccggcgtggtggcg
cggatcgaccgcctgaaggaggcgctcgtcacggcggaggactacgccgcctggtcgggc
ggcctctccgaagaacctgacgcgttggcgcgcaccgcccgcgagcgcgagttcgcccag
ctctacctcgcgcacgaccggatgctcgccgagcagagcgcgatcgacgagggcgacctg
ctgctgcgcgccgtcgcgctgctgcgcgagcacgagcacgtgcgggagggcctgggcggc
cgctaccggcacgtcctcgtcgacgagctgcaggacctcggccccggcgcggtgcagctc
gtcgggctgctcgccgcggggaacgtcgacgggccgaacctcgtggtgtgcgccgacgac
gaccagtgcacgcagcgcctgcgcaacgccgcggcgaagaacgtggccgacgtgcgccgc
gcgcaccccgacgcgccggtggtccggctcgaggagtcgttccggtgctcgcagcgcatc
ctcgacgcggcgggggcggttctcgcgcaggcgccggaccggatcgagaagacgatctcc
gggccgcagggcggcacggtccaggtctggcgggcggccaacgagcgcgcccaggcgcag
aacgccgccgcggagatcgaacggatggtgcgcgaggggacgcccgcgtcggagatcgcg
gtgctcgtgcgcaacgtgcgcaacgagggccaggcgatcgcgtcggccctcgccgagcgc
gcggtgccgtaccgggtcgtcggcgcggcgacgttcttccagcgtgccgaggtgcgcgac
ctcctcgcctggctgcggctgctcaacgatccgcacgacgcgggcgccgtggtgcgcgcg
ctctcgcgggcgccgatcgagctgcgcgccgccgacctcgcgcgcgtcatccagatcgcc
cggcggcgcaagctcgacatggtcggcgcgctcgccgcgtccaccgaatcgccgcagatc
ccgccggagtcgcgcgagcggatcctcgcgttcctgaagctgcaccgcagcgcgggcgcg
gcgctggacaccacacgcccggacctcttcgtgcaccggctcatcgaccggctcgggctg
cggcgccagcagctgttcgccgcgcaggccgacgtcgtcgagcgactgcgcagcctcgcc
cgcttcggcgacctcgccgcagcccacgtgcgccgcgacccgcaggccaccacacgcgac
ttcgcccgctacatcgccgcggtcgcggaggccgggctgccgcaggacgaggagctggac
ggcggctccccaccggaggccgtgcgcgtcgtggggatgcgccaggccaagacgatcgag
gccgaccacgtcttcgtcctcggcctgcacggcgcacgcatgccgggcgcgcgccgcccg
cagtacgagccgatccccgacgcgctcttgcgcgaggacgtgcccgacgacacgcgcgca
aaccacgtcggcgagatgcggcgcctgctcgccctggcgatgacccgcgcccggcgcacc
ctcgtcctcgcctaccccgcccactccgagcgcggcgcggcccagcccgcgtcaccgttc
ctcgaggacgtgcgcgccgcgctggacctgccggaggagccccgcgccgaggagctgttc
gggccggaggagacgctgcacgcgaccttccaggcgctgcgcgacaccctgctgcacgac
gcggcgaaggtcggcaagggcctcggcgaactgcgcctggagaccgacctcgacgtcacc
cactcggtggtccggtacctggagctggtgaaggtcgcggcgctgctggagcgccccacc
gggcagaccgtgagcgatgccctgcccctgatcaaccagcggctgggcgcggacctgtcg
ccgctgcagcgcgagatcctggagtccagcgaactcgacgcgctgctgctggacgccgag
cgggatgaccgcgcgcgggccgcggcccgatccgcgcggccggagccgtcgctggagccc
ttcctgccgcggcgcggcgagggactcgcgctctcggcctcggacatcgagacgtaccgg
atgtgcccgctgaagtacaagttcgcacgggtgttccgcatcccgcaggaaccgacggtc
aaccagcggttcggcatcatcgtccaccaggtcctggagcggtaccacgggacgggcatg
acgtccctcgacgaactgctcggcctgctcgacgccggctggcggcgcggcgggatggac
gacggcgagcaggccaagcagctgcggggcaaggccgaggcggcgctgcggcggtactgg
gagcgccagcgcgacgagggcgtcgagccggtctggatcgagaagtccttcagcttccag
atgggcccgcacacgctgcgcggccgggtcgaccgcgtcgaccggctgcccgacggcgcg
tacgagctcatcgactacaagacaggccggccgcggtcggcccaccagctccgcgaggac
gtgcagctctcgctgtacgcgatcggggcgcgggaggcgtggcacctggaggcgagcgac
caggcgtacctgtacgtcctcgacgacgagaaggtgcgcgtgcccacggaggagatcgac
ccggactggatccgggacacggtcttcgaggtggccgaagggatcctcgggcagggcttc
gagccgaccccgtcgttcgccgcgtgctcgatgtgcgactaccggatcgcgtgtccggcg
gcggagcggtag
DBGET
integrated database retrieval system
